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  5. Ceric.21G056200.1

Ceric.21G056200.1 (Ceric.21G056200)


Aliases : Ceric.21G056200

Description : pectin methylesterase & original description: pacid=50604144 polypeptide=Ceric.21G056200.1.p locus=Ceric.21G056200 ID=Ceric.21G056200.1.v2.1 annot-version=v2.1


Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.21G056200.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00085870 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
AMTR_s00106p00092510 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
Als_g08007 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11060 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g12101 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01243 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07992 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16751 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20021 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g21373 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g22415 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g56742 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g58922 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene20189.t1 Aspi01Gene20189 pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene55625.t1 Aspi01Gene55625 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0033.g024992 No alias pectin methylesterase & original description: CDS=226-1431 0.04 OrthoFinder output from all 47 species
Azfi_s0040.g026612 No alias pectin methylesterase & original description: CDS=139-1269 0.03 OrthoFinder output from all 47 species
Azfi_s0103.g044651 No alias pectin methylesterase & original description: CDS=1-1083 0.02 OrthoFinder output from all 47 species
Azfi_s0516.g074982 No alias not classified & original description: CDS=1-498 0.04 OrthoFinder output from all 47 species
Azfi_s0648.g080900 No alias pectin methylesterase & original description: CDS=62-1303 0.08 OrthoFinder output from all 47 species
Azfi_s1046.g096024 No alias not classified & original description: CDS=62-952 0.07 OrthoFinder output from all 47 species
Ceric.03G008900.1 Ceric.03G008900 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.11G008400.1 Ceric.11G008400 pectin methylesterase & original description:... 0.09 OrthoFinder output from all 47 species
Ceric.13G037300.1 Ceric.13G037300 pectin methylesterase & original description:... 0.12 OrthoFinder output from all 47 species
Ceric.13G038200.1 Ceric.13G038200 pectin methylesterase & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.15G045300.1 Ceric.15G045300 not classified & original description: pacid=50640021... 0.05 OrthoFinder output from all 47 species
Ceric.16G044000.1 Ceric.16G044000 pectin methylesterase & original description:... 0.08 OrthoFinder output from all 47 species
Ceric.21G056100.1 VGDH1, Ceric.21G056100 not classified & original description: pacid=50603924... 0.06 OrthoFinder output from all 47 species
Ceric.37G019000.1 Ceric.37G019000 pectin methylesterase & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g00830 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g07534 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g11068 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g11820 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Dac_g17627 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g20667 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g28954 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g51672 No alias pectin methylesterase & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g33455 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02245 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015290001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
GSVIVT01018823001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.06 OrthoFinder output from all 47 species
MA_6149868g0010 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Mp1g17560.1 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Msp_g08120 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03614 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25019 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g34778 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g06428 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25737 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26065 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27386 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29702 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30829 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g11683 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g10459 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g25901 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63851 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004950 No alias pectin methylesterase & original description: CDS=716-1846 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005602 No alias pectin methylesterase & original description: CDS=911-2185 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016099 No alias pectin methylesterase & original description: CDS=1-1224 0.03 OrthoFinder output from all 47 species
Sam_g36779 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07165 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29457 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g37234 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g40449 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g41355 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54581 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10170 No alias pecTin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14064 No alias pecTin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g19866 No alias pecTin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e033546_P001 Zm00001e033546 pectin methylesterase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 85 377
No external refs found!