Aliases : ATCSP2, GRP2, CSDP2, CSP2, Ceric.22G017900
Description : cold-responsive mRNA chaperone *(CSD) & original description: pacid=50614568 polypeptide=Ceric.22G017900.1.p locus=Ceric.22G017900 ID=Ceric.22G017900.1.v2.1 annot-version=v2.1
Gene families : OG0001037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001037_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ceric.22G017900.1 | |
| Cluster | HCCA: Cluster_127 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aop_g21369 | GRP2B, ATGRP2B, ATCSP4 | cold-responsive mRNA chaperone *(CSD) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Mp1g04040.1 | GRP2B, ATGRP2B, ATCSP4 | RNA chaperone (CSP). mRNA chaperone (CSD) | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g06106 | No alias | cold-responsive mRNA chaperone *(CSD) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g26933 | No alias | cold-responsive mRNA chaperone *(CSD) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g35491 | No alias | cold-responsive mRNA chaperone *(CSD) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g45087 | No alias | cold-responsive mRNA chaperone *(CSD) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g48227 | No alias | cold-responsive mRNA chaperone *(CSD) & original... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
