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  5. Ceric.22G049100.1

Ceric.22G049100.1 (Ceric.22G049100)


Aliases : Ceric.22G049100

Description : histone H3 variant *(CENH3) & original description: pacid=50614205 polypeptide=Ceric.22G049100.1.p locus=Ceric.22G049100 ID=Ceric.22G049100.1.v2.1 annot-version=v2.1


Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.22G049100.1
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00168040 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
AMTR_s00030p00044250 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from all 47 species
AT1G09200 No alias Histone superfamily protein 0.08 OrthoFinder output from all 47 species
AT3G27360 No alias Histone superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G10390 No alias Histone superfamily protein 0.07 OrthoFinder output from all 47 species
AT5G10400 No alias Histone superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G65360 No alias Histone superfamily protein 0.08 OrthoFinder output from all 47 species
Ala_g12785 No alias histone H3 variant *(CENH3) & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g26587 No alias histone *(H3) & original description: none 0.1 OrthoFinder output from all 47 species
Aop_g19848 No alias histone *(H3) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g33085 No alias histone *(H3) & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene42452.t1 Aspi01Gene42452 histone H3 variant *(CENH3) & original description: none 0.04 OrthoFinder output from all 47 species
Cre16.g661450 No alias Cell cycle.mitosis and meiosis.chromosome... 0.06 OrthoFinder output from all 47 species
Dac_g02480 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12416 No alias histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01026582001 No alias Histone H3.2 OS=Pisum sativum 0.09 OrthoFinder output from all 47 species
GSVIVT01027073001 HTR12, CENH3 Cell cycle.mitosis and meiosis.chromosome... 0.06 OrthoFinder output from all 47 species
Gb_23769 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_27618 No alias histone (H3) 0.08 OrthoFinder output from all 47 species
Gb_29026 No alias histone (H3) 0.05 OrthoFinder output from all 47 species
Gb_29027 No alias histone (H3) 0.11 OrthoFinder output from all 47 species
LOC_Os05g36280.1 LOC_Os05g36280 histone (H3) 0.04 OrthoFinder output from all 47 species
LOC_Os05g41080.1 LOC_Os05g41080 histone H3 variant (CENH3) 0.03 OrthoFinder output from all 47 species
LOC_Os06g06510.1 LOC_Os06g06510 histone (H3) 0.14 OrthoFinder output from all 47 species
Len_g04468 No alias histone *(H3) & original description: none 0.06 OrthoFinder output from all 47 species
Mp3g07730.1 No alias histone (H3) 0.05 OrthoFinder output from all 47 species
Mp7g10730.1 No alias histone (H3) 0.05 OrthoFinder output from all 47 species
Mp7g16200.1 No alias histone (H3) 0.07 OrthoFinder output from all 47 species
Mp7g18030.1 No alias histone (H3) 0.05 OrthoFinder output from all 47 species
Msp_g08229 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g36081 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41988 No alias histone *(H3) & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g20165 No alias histone H3 variant *(CENH3) & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g22036 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g074000.3.1 Solyc01g074000 histone (H3) 0.09 OrthoFinder output from all 47 species
Solyc01g079110.4.1 Solyc01g079110 histone (H3) 0.12 OrthoFinder output from all 47 species
Solyc01g080600.4.1 Solyc01g080600 histone (H3) 0.12 OrthoFinder output from all 47 species
Solyc01g086820.4.1 Solyc01g086820 histone (H3) 0.12 OrthoFinder output from all 47 species
Solyc01g095650.4.1 HTR12, CENH3,... histone H3 variant (CENH3) 0.06 OrthoFinder output from all 47 species
Solyc02g077480.1.1 Solyc02g077480 histone (H3) 0.13 OrthoFinder output from all 47 species
Spa_g42522 No alias histone *(H3) & original description: none 0.15 OrthoFinder output from all 47 species
Spa_g52114 No alias histone *(H3) & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g56118 No alias histone *(H3) & original description: none 0.13 OrthoFinder output from all 47 species
Tin_g03087 No alias histone *(H3) & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g04242 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09717 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g25835 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e008160_P001 Zm00001e008160 histone (H3) 0.03 OrthoFinder output from all 47 species
Zm00001e016861_P001 Zm00001e016861 histone (H3) 0.08 OrthoFinder output from all 47 species
Zm00001e019170_P001 Zm00001e019170 histone (H3) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 40 161
No external refs found!