1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.25G022800.1

Ceric.25G022800.1 (Ceric.25G022800)


Aliases : Ceric.25G022800

Description : not classified & original description: pacid=50594192 polypeptide=Ceric.25G022800.1.p locus=Ceric.25G022800 ID=Ceric.25G022800.1.v2.1 annot-version=v2.1


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.25G022800.1
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00252800 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g39530... 0.03 OrthoFinder output from all 47 species
AMTR_s00025p00218280 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g16860... 0.03 OrthoFinder output from all 47 species
AT3G49710 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g034364 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17643 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21042 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23930 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31195 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16161 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08252 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16854 EMB2758 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67885 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22046.t1 Aspi01Gene22046 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene46907.t1 REME1, Aspi01Gene46907 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g44411 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G077100.1 Ceric.04G077100 not classified & original description: pacid=50631154... 0.07 OrthoFinder output from all 47 species
Ceric.05G093000.1 Ceric.05G093000 not classified & original description: pacid=50577993... 0.03 OrthoFinder output from all 47 species
Ceric.08G040300.1 Ceric.08G040300 not classified & original description: pacid=50638085... 0.04 OrthoFinder output from all 47 species
Ceric.11G087600.1 OTP84, Ceric.11G087600 not classified & original description: pacid=50595872... 0.04 OrthoFinder output from all 47 species
Ceric.12G084700.1 Ceric.12G084700 not classified & original description: pacid=50602071... 0.04 OrthoFinder output from all 47 species
Ceric.15G021100.1 Ceric.15G021100 not classified & original description: pacid=50639951... 0.04 OrthoFinder output from all 47 species
Ceric.29G083600.1 Ceric.29G083600 ssDNA-binding protein *(OSB) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.32G057100.1 Ceric.32G057100 not classified & original description: pacid=50598475... 0.05 OrthoFinder output from all 47 species
Ceric.36G001100.1 Ceric.36G001100 not classified & original description: pacid=50568746... 0.04 OrthoFinder output from all 47 species
Ceric.39G046500.1 Ceric.39G046500 not classified & original description: pacid=50582543... 0.03 OrthoFinder output from all 47 species
Dac_g03777 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05005 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g39198 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03570 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17701 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g03727 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g03408 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10317671g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
Nbi_g05835 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g12450 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32476 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57521 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g01154 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33170 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g55046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002062 No alias not classified & original description: CDS=1-1716 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006756 CRR22 not classified & original description: CDS=1-1713 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014176 No alias not classified & original description: CDS=1-2259 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016469 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2448 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0124.g021596 No alias not classified & original description: CDS=1-2502 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0177.g024659 No alias not classified & original description: CDS=1-642 0.03 OrthoFinder output from all 47 species
Spa_g31286 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g48112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08462 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10948 MEF22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g43996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009143 nucleoside triphosphate catabolic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0047429 nucleoside triphosphate diphosphatase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901292 nucleoside phosphate catabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 236 283
IPR002885 Pentatricopeptide_repeat 338 385
IPR002885 Pentatricopeptide_repeat 136 183
IPR002885 Pentatricopeptide_repeat 34 81
IPR002885 Pentatricopeptide_repeat 108 133
IPR002885 Pentatricopeptide_repeat 310 335
IPR002885 Pentatricopeptide_repeat 414 438
IPR002885 Pentatricopeptide_repeat 439 485
No external refs found!