Aliases : Ceric.25G027300
Description : component *(ADA1) of SAGA transcription co-activator complex & original description: pacid=50594555 polypeptide=Ceric.25G027300.1.p locus=Ceric.25G027300 ID=Ceric.25G027300.1.v2.1 annot-version=v2.1
Gene families : OG0001506 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001506_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ceric.25G027300.1 | |
| Cluster | HCCA: Cluster_147 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Ehy_g18080 | No alias | component *(ADA1) of SAGA transcription co-activator... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01016065001 | No alias | RNA biosynthesis.RNA polymerase II-dependent... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g56300.1 | LOC_Os04g56300 | component ADA1 of SAGA transcription co-activator complex | 0.03 | OrthoFinder output from all 47 species | |
| Len_g01832 | No alias | component *(ADA1) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g02173 | No alias | component *(ADA1) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| MA_7243g0030 | No alias | component ADA1 of SAGA transcription co-activator complex | 0.02 | OrthoFinder output from all 47 species | |
| Mp5g08050.1 | No alias | component ADA1 of SAGA transcription co-activator complex | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g02344 | No alias | component *(ADA1) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g04822 | No alias | component *(ADA1) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g40490 | No alias | component *(ADA1) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g10664 | No alias | component *(ADA1) of SAGA transcription co-activator... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc06g068610.3.1 | Solyc06g068610 | component ADA1 of SAGA transcription co-activator complex | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e005767_P001 | Zm00001e005767 | component ADA1 of SAGA transcription co-activator complex | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e006681_P001 | Zm00001e006681 | component ADA1 of SAGA transcription co-activator complex | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e041823_P001 | Zm00001e041823 | component ADA1 of SAGA transcription co-activator complex | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0070461 | SAGA-type complex | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| CC | GO:0005681 | spliceosomal complex | IEP | HCCA |
| BP | GO:0006099 | tricarboxylic acid cycle | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006479 | protein methylation | IEP | HCCA |
| MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
| BP | GO:0008213 | protein alkylation | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| MF | GO:0008276 | protein methyltransferase activity | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | HCCA |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| BP | GO:0016571 | histone methylation | IEP | HCCA |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | HCCA |
| MF | GO:0018024 | histone lysine N-methyltransferase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| BP | GO:0034968 | histone lysine methylation | IEP | HCCA |
| MF | GO:0042054 | histone methyltransferase activity | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046912 | acyltransferase activity, acyl groups converted into alkyl on transfer | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR024738 | Hfi1/Tada1 | 67 | 376 |
| No external refs found! |
