1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.25G075100.1

Ceric.25G075100.1 (HSP60, HSP60-3B,...)


Aliases : HSP60, HSP60-3B, Ceric.25G075100

Description : chaperone *(Hsp60) & original description: pacid=50593987 polypeptide=Ceric.25G075100.1.p locus=Ceric.25G075100 ID=Ceric.25G075100.1.v2.1 annot-version=v2.1


Gene families : OG0001609 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001609_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.25G075100.1
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00241820 HSP60, HSP60-3B,... External stimuli response.temperature.Hsp... 0.04 OrthoFinder output from all 47 species
AMTR_s00147p00091670 HSP60, HSP60-3B,... External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
AT2G33210 HSP60-2 heat shock protein 60-2 0.07 OrthoFinder output from all 47 species
AT3G13860 HSP60-3A heat shock protein 60-3A 0.03 OrthoFinder output from all 47 species
Adi_g007058 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g011946 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14272 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19188 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g07324 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22632 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0104.g044833 HSP60, HSP60-3B chaperone *(Hsp60) & original description: CDS=368-2095 0.04 OrthoFinder output from all 47 species
Cba_g03933 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001269.7 HSP60, HSP60-3B External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
Dac_g11411 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g10198 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g47313 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016859001 HSP60-3A External stimuli response.temperature.Hsp... 0.09 OrthoFinder output from all 47 species
GSVIVT01029025001 HSP60, HSP60-3B External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
Gb_37654 HSP60, HSP60-3B chaperone (Hsp60) 0.03 OrthoFinder output from all 47 species
LOC_Os05g46290.1 HSP60-3A, LOC_Os05g46290 chaperone (Hsp60) 0.05 OrthoFinder output from all 47 species
Len_g02840 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g07937 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g12398 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436324g0010 HSP60, HSP60-3B chaperone (Hsp60) 0.03 OrthoFinder output from all 47 species
Msp_g11889 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g47850 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g27554 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53856 HSP60-2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011153 HSP60, HSP60-3B not classified & original description: CDS=157-2091 0.03 OrthoFinder output from all 47 species
Sam_g10342 No alias chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g10343 No alias chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Solyc03g121640.3.1 HSP60-3A, Solyc03g121640 chaperone (Hsp60) 0.07 OrthoFinder output from all 47 species
Solyc09g091180.3.1 HSP60, HSP60-3B,... chaperone (Hsp60) 0.05 OrthoFinder output from all 47 species
Spa_g08282 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18561 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06599 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e004641_P001 HSP60, HSP60-3B,... chaperone (Hsp60) 0.05 OrthoFinder output from all 47 species
Zm00001e032273_P004 HSP60-3A, Zm00001e032273 chaperone (Hsp60) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
CC GO:0030684 preribosome IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 52 553
No external refs found!