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  5. Ceric.26G038300.1

Ceric.26G038300.1 (YCF3, Ceric.26G038300)


Aliases : YCF3, Ceric.26G038300

Description : not classified & original description: pacid=50599550 polypeptide=Ceric.26G038300.1.p locus=Ceric.26G038300 ID=Ceric.26G038300.1.v2.1 annot-version=v2.1


Gene families : OG0006366 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006366_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.26G038300.1
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
ATCG00360 YCF3 Tetratricopeptide repeat (TPR)-like superfamily protein 0.11 OrthoFinder output from all 47 species
Aev_g34996 YCF3 protein involved in PS-I assembly *(YCF3) & original... 0.32 OrthoFinder output from all 47 species
Als_g33718 YCF3 protein involved in PS-I assembly *(YCF3) & original... 0.07 OrthoFinder output from all 47 species
Cba_g70304 YCF3 protein involved in PS-I assembly *(YCF3) & original... 0.09 OrthoFinder output from all 47 species
Ceric.02G013500.1 YCF3, Ceric.02G013500 protein involved in PS-I assembly *(YCF3) & original... 0.07 OrthoFinder output from all 47 species
Ceric.09G047900.1 YCF3, Ceric.09G047900 protein involved in PS-I assembly *(YCF3) & original... 0.11 OrthoFinder output from all 47 species
Ceric.1Z161500.1 YCF3, Ceric.1Z161500 not classified & original description: pacid=50596948... 0.09 OrthoFinder output from all 47 species
Ceric.31G008800.1 Ceric.31G008800 not classified & original description: pacid=50574640... 0.13 OrthoFinder output from all 47 species
Ceric.33G023800.1 YCF3, Ceric.33G023800 protein involved in PS-I assembly *(YCF3) & original... 0.09 OrthoFinder output from all 47 species
Ceric.36G045200.1 YCF3, Ceric.36G045200 not classified & original description: pacid=50568804... 0.02 OrthoFinder output from all 47 species
GSVIVT01016018001 No alias Photosystem I assembly protein Ycf3 OS=Nicotiana tabacum 0.04 OrthoFinder output from all 47 species
LOC_Os01g57966.1 YCF3, LOC_Os01g57966 YCF3 protein involved in PS-I assembly 0.22 OrthoFinder output from all 47 species
LOC_Os04g16736.1 YCF3, LOC_Os04g16736 YCF3 protein involved in PS-I assembly 0.22 OrthoFinder output from all 47 species
LOC_Os04g16762.1 YCF3, LOC_Os04g16762 YCF3 protein involved in PS-I assembly 0.16 OrthoFinder output from all 47 species
LOC_Os10g21254.1 YCF3, LOC_Os10g21254 YCF3 protein involved in PS-I assembly 0.22 OrthoFinder output from all 47 species
LOC_Os10g38216.1 YCF3, LOC_Os10g38216 YCF3 protein involved in PS-I assembly 0.22 OrthoFinder output from all 47 species
Lfl_g14015 YCF3 not classified & original description: none 0.13 OrthoFinder output from all 47 species
Lfl_g19607 YCF3 protein involved in PS-I assembly *(YCF3) & original... 0.17 OrthoFinder output from all 47 species
Mp3g09610.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g20105 YCF3 protein involved in PS-I assembly *(YCF3) & original... 0.09 OrthoFinder output from all 47 species
Pir_g08805 YCF3 protein involved in PS-I assembly *(YCF3) & original... 0.13 OrthoFinder output from all 47 species
Sam_g21679 No alias protein involved in PS-I assembly *(YCF3) & original... 0.1 OrthoFinder output from all 47 species
Solyc00g500058.1.1 YCF3, Solyc00g500058 YCF3 protein involved in PS-I assembly 0.08 OrthoFinder output from all 47 species
Solyc00g500059.1.1 Solyc00g500059 Photosystem I assembly protein Ycf3 OS=Solanum... 0.11 OrthoFinder output from all 47 species
Solyc00g500144.1.1 Solyc00g500144 Photosystem I assembly protein Ycf3 OS=Solanum... 0.11 OrthoFinder output from all 47 species
Solyc00g500210.1.1 YCF3, Solyc00g500210 YCF3 protein involved in PS-I assembly 0.08 OrthoFinder output from all 47 species
Solyc00g500211.1.1 Solyc00g500211 Photosystem I assembly protein Ycf3 OS=Solanum... 0.11 OrthoFinder output from all 47 species
Solyc09g015280.1.1 YCF3, Solyc09g015280 Photosystem I assembly protein Ycf3 OS=Solanum... 0.09 OrthoFinder output from all 47 species
Solyc09g015320.3.1 PSAA, Solyc09g015320 Photosystem I P700 chlorophyll a apoprotein A1... 0.18 OrthoFinder output from all 47 species
Spa_g00949 YCF3 protein involved in PS-I assembly *(YCF3) & original... 0.2 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015995 chlorophyll biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016168 chlorophyll binding IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001440 TPR_1 32 61
No external refs found!