Ceric.27G020400.1 (Ceric.27G020400)


Aliases : Ceric.27G020400

Description : not classified & original description: pacid=50605502 polypeptide=Ceric.27G020400.1.p locus=Ceric.27G020400 ID=Ceric.27G020400.1.v2.1 annot-version=v2.1


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.27G020400.1

Target Alias Description ECC score Gene Family Method Actions
AT4G39952 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g025455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g033331 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16579 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g31162 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g33780 DOT4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18255 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g19242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g27639 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g33642 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28242 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02910 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03401 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03755 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04187 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06659 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08251 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08755 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08782 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09002 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09162 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14336 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16536 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16804 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21153 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23672 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23676 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g26688 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26838 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g27203 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28412 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28526 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g29160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33568 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g67673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68104 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68113 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g69569 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35394.t1 Aspi01Gene35394 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0008.g011300 No alias not classified & original description: CDS=1-2337 0.06 OrthoFinder output from all 47 species
Azfi_s0054.g033567 EMB2758 not classified & original description: CDS=1-2352 0.04 OrthoFinder output from all 47 species
Azfi_s0280.g062299 OSB3 ssDNA-binding protein *(OSB) & original description: CDS=94-1002 0.03 OrthoFinder output from all 47 species
Cba_g04014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05288 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07289 MEF21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07300 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11852 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g15873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20703 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20759 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g26042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35174 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g74755 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g74880 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.10G047500.1 Ceric.10G047500 not classified & original description: pacid=50612222... 0.04 OrthoFinder output from all 47 species
Dac_g04194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05109 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g05672 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g16383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18763 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25217 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30287 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45940 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10613 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g13383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13626 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16413 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21648 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21829 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51445 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g16748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18216 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g29669 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os08g37520.1 LOC_Os08g37520 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Lfl_g05691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28067 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32904 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g01336 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g20531 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g27069 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28801 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g29564 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g33823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g31921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g13992 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23954 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12406 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13583 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57991 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g58854 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20771 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23561 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23593 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30866 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31751 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56302 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07845 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g24878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35469 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g064750.2.1 Solyc04g064750 RNA editing factor (MEF12). serine carboxypeptidase 0.04 OrthoFinder output from all 47 species
Spa_g18554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25320 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55074 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 172 219
IPR002885 Pentatricopeptide_repeat 144 168
IPR002885 Pentatricopeptide_repeat 376 404
IPR002885 Pentatricopeptide_repeat 244 267
IPR002885 Pentatricopeptide_repeat 348 373
IPR002885 Pentatricopeptide_repeat 44 64
IPR002885 Pentatricopeptide_repeat 72 99
IPR002885 Pentatricopeptide_repeat 576 622
IPR002885 Pentatricopeptide_repeat 272 320
IPR002885 Pentatricopeptide_repeat 474 521
No external refs found!