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  5. Ceric.27G024400.1

Ceric.27G024400.1 (Ceric.27G024400)


Aliases : Ceric.27G024400

Description : histone *(H3) & original description: pacid=50605092 polypeptide=Ceric.27G024400.1.p locus=Ceric.27G024400 ID=Ceric.27G024400.1.v2.1 annot-version=v2.1


Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.27G024400.1
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00044250 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
AT1G09200 No alias Histone superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G19890 ATMGH3, MGH3 male-gamete-specific histone H3 0.02 OrthoFinder output from all 47 species
AT3G27360 No alias Histone superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G10390 No alias Histone superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G65360 No alias Histone superfamily protein 0.02 OrthoFinder output from all 47 species
Ala_g30174 No alias histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g43453 No alias histone *(H3) & original description: none 0.11 OrthoFinder output from all 47 species
Aop_g19848 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33085 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Cre06.g265250 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from all 47 species
Cre06.g266650 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre06.g267950 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre06.g268350 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274000 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre06.g274101 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre06.g274350 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre06.g274850 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre06.g275750 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre06.g276600 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre06.g276850 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre12.g504650 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre12.g504800 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre12.g505500 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre12.g506300 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre12.g506500 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre13.g569950 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre16.g650300 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre17.g708150 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre17.g708700 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre17.g709050 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from all 47 species
Dac_g01991 No alias histone H3 variant *(CENH3) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g02480 No alias histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g01832 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g47570 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026582001 No alias Histone H3.2 OS=Pisum sativum 0.03 OrthoFinder output from all 47 species
GSVIVT01027073001 HTR12, CENH3 Cell cycle.mitosis and meiosis.chromosome... 0.03 OrthoFinder output from all 47 species
Gb_15586 No alias histone (H3) 0.04 OrthoFinder output from all 47 species
Gb_30564 No alias histone (H3) 0.05 OrthoFinder output from all 47 species
Gb_36661 No alias histone (H3) 0.04 OrthoFinder output from all 47 species
LOC_Os05g36280.1 LOC_Os05g36280 histone (H3) 0.03 OrthoFinder output from all 47 species
LOC_Os06g04030.1 LOC_Os06g04030 histone (H3) 0.04 OrthoFinder output from all 47 species
Len_g04468 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05015 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g26206 No alias histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g23375 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g25103 No alias histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
MA_222556g0010 No alias Histone H3.2 OS=Lilium longiflorum (sp|q402e1|h32_lillo : 116.0) 0.05 OrthoFinder output from all 47 species
MA_24261g0010 No alias histone (H3) 0.04 OrthoFinder output from all 47 species
MA_356208g0010 No alias histone (H3) 0.05 OrthoFinder output from all 47 species
Mp3g09090.1 No alias histone (H3) 0.05 OrthoFinder output from all 47 species
Mp7g10730.1 No alias histone (H3) 0.05 OrthoFinder output from all 47 species
Mp7g16200.1 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
Mp7g18030.1 No alias histone (H3) 0.03 OrthoFinder output from all 47 species
Msp_g36081 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Smo103546 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Smo438193 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Solyc01g074000.3.1 Solyc01g074000 histone (H3) 0.06 OrthoFinder output from all 47 species
Solyc01g079110.4.1 Solyc01g079110 histone (H3) 0.05 OrthoFinder output from all 47 species
Solyc01g080600.4.1 Solyc01g080600 histone (H3) 0.06 OrthoFinder output from all 47 species
Solyc01g086820.4.1 Solyc01g086820 histone (H3) 0.05 OrthoFinder output from all 47 species
Solyc02g077480.1.1 Solyc02g077480 histone (H3) 0.04 OrthoFinder output from all 47 species
Solyc10g008910.1.1 Solyc10g008910 histone (H3) 0.04 OrthoFinder output from all 47 species
Spa_g04339 No alias histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g33395 No alias histone *(H3) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g42522 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52114 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03087 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008155_P001 Zm00001e008155 histone (H3) 0.03 OrthoFinder output from all 47 species
Zm00001e016861_P001 Zm00001e016861 histone (H3) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 132
No external refs found!