Ceric.28G027300.1 (CRR22, Ceric.28G027300)


Aliases : CRR22, Ceric.28G027300

Description : not classified & original description: pacid=50569783 polypeptide=Ceric.28G027300.1.p locus=Ceric.28G027300 ID=Ceric.28G027300.1.v2.1 annot-version=v2.1


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.28G027300.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00090010 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
AMTR_s00041p00129840 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g32430,... 0.08 OrthoFinder output from all 47 species
AMTR_s00170p00032020 OTP86,... Pentatricopeptide repeat-containing protein At5g16860... 0.12 OrthoFinder output from all 47 species
AT1G31010 OSB4 organellar single-stranded DNA binding protein 4 0.01 OrthoFinder output from all 47 species
AT3G05340 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 OrthoFinder output from all 47 species
AT3G11460 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G13880 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.07 OrthoFinder output from all 47 species
AT3G25060 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.06 OrthoFinder output from all 47 species
AT4G14850 LOI1, MEF11 Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G33990 EMB2758 Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 OrthoFinder output from all 47 species
AT5G09950 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G27110 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G65570 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 OrthoFinder output from all 47 species
Aop_g23385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08082.t1 EMB2261, Aspi01Gene08082 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene31490.t1 Aspi01Gene31490 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene71401.t1 REME1, Aspi01Gene71401 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0006.g010527 No alias not classified & original description: CDS=1-2745 0.09 OrthoFinder output from all 47 species
Azfi_s0008.g011584 No alias not classified & original description: CDS=1-2754 0.02 OrthoFinder output from all 47 species
Azfi_s0120.g046799 No alias not classified & original description: CDS=1-2385 0.12 OrthoFinder output from all 47 species
Cba_g04690 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05272 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g06376 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08223 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08252 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08260 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08264 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08804 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08927 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16553 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16864 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17218 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g17265 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26818 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g37399 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38650 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g39841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40976 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g43323 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g45930 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50153 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g04422 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_114565g0020 OTP84 Pentatricopeptide repeat-containing protein At5g16860... 0.04 OrthoFinder output from all 47 species
MA_121512g0010 No alias ssDNA-binding protein (OSB) 0.03 OrthoFinder output from all 47 species
MA_141731g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_16917g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
MA_230261g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
MA_27726g0010 VAC1, ECB2, ATECB2 RNA editing factor (ECB2/VAC1) 0.03 OrthoFinder output from all 47 species
MA_36643g0010 CRR22 Pentatricopeptide repeat-containing protein At3g03580... 0.04 OrthoFinder output from all 47 species
MA_77675g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.11 OrthoFinder output from all 47 species
MA_794605g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.06 OrthoFinder output from all 47 species
MA_961981g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
MA_96662g0010 CRR22 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
Msp_g44114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53018 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007447 No alias not classified & original description: CDS=108-3026 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008668 No alias not classified & original description: CDS=1-2001 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022201 No alias not classified & original description: CDS=265-2808 0.01 OrthoFinder output from all 47 species
Sam_g02113 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g12009 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g52122 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Smo106624 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 90 136
IPR002885 Pentatricopeptide_repeat 164 188
IPR002885 Pentatricopeptide_repeat 293 317
IPR002885 Pentatricopeptide_repeat 355 379
No external refs found!