Ceric.28G052500.1 (Ceric.28G052500)


Aliases : Ceric.28G052500

Description : not classified & original description: pacid=50569929 polypeptide=Ceric.28G052500.1.p locus=Ceric.28G052500 ID=Ceric.28G052500.1.v2.1 annot-version=v2.1


Gene families : OG0008286 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008286_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.28G052500.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g16236 No alias component *(uS12m) of small mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Aob_g13504 No alias component *(uS12m) of small mitoribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Cba_g12837 No alias component *(uS12m) of small mitoribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ceric.01G056200.1 Ceric.01G056200 not classified & original description: pacid=50592272... 0.08 OrthoFinder output from all 47 species
Ceric.01G057700.1 Ceric.01G057700 not classified & original description: pacid=50591871... 0.06 OrthoFinder output from all 47 species
Ceric.02G004700.1 Ceric.02G004700 not classified & original description: pacid=50584292... 0.08 OrthoFinder output from all 47 species
Ceric.05G043100.1 Ceric.05G043100 not classified & original description: pacid=50578321... 0.09 OrthoFinder output from all 47 species
Ceric.06G028400.1 Ceric.06G028400 not classified & original description: pacid=50620499... 0.08 OrthoFinder output from all 47 species
Ceric.18G054400.1 Ceric.18G054400 not classified & original description: pacid=50621895... 0.1 OrthoFinder output from all 47 species
Ceric.30G022900.1 Ceric.30G022900 not classified & original description: pacid=50607946... 0.04 OrthoFinder output from all 47 species
Ceric.33G038700.1 Ceric.33G038700 not classified & original description: pacid=50606468... 0.05 OrthoFinder output from all 47 species
GSVIVT01002752001 No alias Ribosomal protein S12, mitochondrial OS=Nicotiana sylvestris 0.05 OrthoFinder output from all 47 species
Solyc00g500254.1.1 RPL20, Solyc00g500254 50S ribosomal protein L20, chloroplastic OS=Coffea... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005840 ribosome IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!