Aliases : RPL22, Ceric.29G004500
Description : component *(uL22c) of large plastid ribosomal-subunit proteome & original description: pacid=50624859 polypeptide=Ceric.29G004500.1.p locus=Ceric.29G004500 ID=Ceric.29G004500.1.v2.1 annot-version=v2.1
Gene families : OG0008579 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008579_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ceric.29G004500.1 | |
| Cluster | HCCA: Cluster_45 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| ATCG00810 | RPL22 | ribosomal protein L22 | 0.14 | OrthoFinder output from all 47 species | |
| Aev_g00527 | RPL22 | component *(uL22c) of large plastid ribosomal-subunit... | 0.24 | OrthoFinder output from all 47 species | |
| Azfi_s0031.g024539 | RPL22 | not classified & original description: CDS=1-555 | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.05G042500.1 | RPL22, Ceric.05G042500 | component *(uL22c) of large plastid ribosomal-subunit... | 0.1 | OrthoFinder output from all 47 species | |
| Ceric.1Z020100.1 | Ceric.1Z020100 | component *(uL22c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g13089 | RPL22 | component *(uL22c) of large plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Gb_19673 | RPL22 | component psRPL22 of large ribosomal subunit proteome | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os04g16822.1 | RPL22, LOC_Os04g16822 | component psRPL22 of large ribosomal subunit proteome | 0.21 | OrthoFinder output from all 47 species | |
| LOC_Os08g15268.1 | RPL22, LOC_Os08g15268 | component psRPL22 of large ribosomal subunit proteome | 0.24 | OrthoFinder output from all 47 species | |
| Lfl_g13571 | RPL22 | component *(uL22c) of large plastid ribosomal-subunit... | 0.16 | OrthoFinder output from all 47 species | |
| Ore_g00408 | RPL22 | component *(uL22c) of large plastid ribosomal-subunit... | 0.11 | OrthoFinder output from all 47 species | |
| Smo137709 | RPL22 | Protein biosynthesis.organelle translation... | 0.1 | OrthoFinder output from all 47 species | |
| Zm00001e042088_P001 | RPL22, Zm00001e042088 | 50S ribosomal protein L22, chloroplastic OS=Zea mays... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e042144_P001 | RPL22, Zm00001e042144 | component psRPL22 of large ribosomal subunit proteome | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e042492_P001 | RPL22, Zm00001e042492 | component psRPL22 of large ribosomal subunit proteome | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| CC | GO:0034357 | photosynthetic membrane | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| CC | GO:0042651 | thylakoid membrane | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| BP | GO:1902600 | proton transmembrane transport | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
