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  5. Ceric.29G031100.1

Ceric.29G031100.1 (LHCB1.5, LHB1B2,...)


Aliases : LHCB1.5, LHB1B2, Ceric.29G031100

Description : component *(LHCb1/2/3) of LHC-II complex & original description: pacid=50625415 polypeptide=Ceric.29G031100.1.p locus=Ceric.29G031100 ID=Ceric.29G031100.1.v2.1 annot-version=v2.1


Gene families : OG0000137 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000137_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.29G031100.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00069220 LHCB1.5, LHB1B2,... Photosynthesis.photophosphorylation.photosystem... 0.06 OrthoFinder output from all 47 species
AMTR_s00088p00153020 LHCB2.3, LHCB2,... Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
AMTR_s00099p00139960 LHCB5,... Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
AT2G34420 LHCB1.5, LHB1B2 photosystem II light harvesting complex gene B1B2 0.03 OrthoFinder output from all 47 species
AT2G34430 LHCB1.4, LHB1B1 light-harvesting chlorophyll-protein complex II subunit B1 0.03 OrthoFinder output from all 47 species
Ala_g31527 LHCB1.3, CAB140,... component *(LHCb1/2/3) of LHC-II complex & original... 0.12 OrthoFinder output from all 47 species
Ehy_g09693 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Ehy_g12327 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01003201001 LHCB3*1, LHCB3 Chlorophyll a-b binding protein 3, chloroplastic... 0.09 OrthoFinder output from all 47 species
GSVIVT01014439001 LHCB3*1, LHCB3 Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
Mp7g05530.1 LHCB2.3, LHCB2, LHCB2.4 component LHCb1/2/3 of LHC-II complex 0.01 OrthoFinder output from all 47 species
Mp7g05980.1 LHCB2.3, LHCB2, LHCB2.4 component LHCb1/2/3 of LHC-II complex 0.02 OrthoFinder output from all 47 species
Mp7g06750.1 LHCB2.3, LHCB2, LHCB2.4 component LHCb1/2/3 of LHC-II complex 0.01 OrthoFinder output from all 47 species
Mp7g06760.1 LHCB2.3, LHCB2, LHCB2.4 component LHCb1/2/3 of LHC-II complex 0.01 OrthoFinder output from all 47 species
Mp7g06770.1 LHCB2.3, LHCB2, LHCB2.4 component LHCb1/2/3 of LHC-II complex 0.02 OrthoFinder output from all 47 species
Mp7g06780.1 LHCB2.3, LHCB2, LHCB2.4 component LHCb1/2/3 of LHC-II complex 0.02 OrthoFinder output from all 47 species
Mp7g09180.1 LHCB2.3, LHCB2, LHCB2.4 component LHCb1/2/3 of LHC-II complex 0.02 OrthoFinder output from all 47 species
Pnu_g25964 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Pp3c18_8100V3.1 LHCB2.3, LHCB2,... photosystem II light harvesting complex gene 2.1 0.02 OrthoFinder output from all 47 species
Pp3c21_3950V3.1 LHCB2.3, LHCB2,... photosystem II light harvesting complex gene 2.1 0.02 OrthoFinder output from all 47 species
Pp3c6_6830V3.1 LHCB2.2, LHCB2,... photosystem II light harvesting complex gene 2.1 0.03 OrthoFinder output from all 47 species
Solyc07g063600.3.1 LHCB3*1, LHCB3,... component LHCb1/2/3 of LHC-II complex 0.03 OrthoFinder output from all 47 species
Spa_g10842 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Spa_g10843 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Tin_g23329 LHCB1.3, CAB140,... component *(LHCb1/2/3) of LHC-II complex & original... 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 68 234
No external refs found!