Aliases : YCF3, Ceric.29G032800
Description : protein involved in PS-I assembly *(YCF3) & original description: pacid=50625358 polypeptide=Ceric.29G032800.1.p locus=Ceric.29G032800 ID=Ceric.29G032800.1.v2.1 annot-version=v2.1
Gene families : OG0006366 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006366_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ceric.29G032800.1 | |
| Cluster | HCCA: Cluster_43 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| ATCG00360 | YCF3 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.16 | OrthoFinder output from all 47 species | |
| Aev_g34996 | YCF3 | protein involved in PS-I assembly *(YCF3) & original... | 0.35 | OrthoFinder output from all 47 species | |
| Als_g33718 | YCF3 | protein involved in PS-I assembly *(YCF3) & original... | 0.08 | OrthoFinder output from all 47 species | |
| Cba_g70304 | YCF3 | protein involved in PS-I assembly *(YCF3) & original... | 0.12 | OrthoFinder output from all 47 species | |
| Ceric.02G013500.1 | YCF3, Ceric.02G013500 | protein involved in PS-I assembly *(YCF3) & original... | 0.12 | OrthoFinder output from all 47 species | |
| Ceric.09G047900.1 | YCF3, Ceric.09G047900 | protein involved in PS-I assembly *(YCF3) & original... | 0.24 | OrthoFinder output from all 47 species | |
| Ceric.1Z161500.1 | YCF3, Ceric.1Z161500 | not classified & original description: pacid=50596948... | 0.12 | OrthoFinder output from all 47 species | |
| Ceric.28G030600.1 | YCF3, Ceric.28G030600 | not classified & original description: pacid=50569577... | 0.08 | OrthoFinder output from all 47 species | |
| Ceric.31G008800.1 | Ceric.31G008800 | not classified & original description: pacid=50574640... | 0.16 | OrthoFinder output from all 47 species | |
| Ceric.33G023800.1 | YCF3, Ceric.33G023800 | protein involved in PS-I assembly *(YCF3) & original... | 0.09 | OrthoFinder output from all 47 species | |
| GSVIVT01016018001 | No alias | Photosystem I assembly protein Ycf3 OS=Nicotiana tabacum | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os01g57966.1 | YCF3, LOC_Os01g57966 | YCF3 protein involved in PS-I assembly | 0.33 | OrthoFinder output from all 47 species | |
| LOC_Os04g16736.1 | YCF3, LOC_Os04g16736 | YCF3 protein involved in PS-I assembly | 0.33 | OrthoFinder output from all 47 species | |
| LOC_Os04g16762.1 | YCF3, LOC_Os04g16762 | YCF3 protein involved in PS-I assembly | 0.21 | OrthoFinder output from all 47 species | |
| LOC_Os10g21254.1 | YCF3, LOC_Os10g21254 | YCF3 protein involved in PS-I assembly | 0.33 | OrthoFinder output from all 47 species | |
| LOC_Os10g38216.1 | YCF3, LOC_Os10g38216 | YCF3 protein involved in PS-I assembly | 0.33 | OrthoFinder output from all 47 species | |
| Lfl_g14015 | YCF3 | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Lfl_g19607 | YCF3 | protein involved in PS-I assembly *(YCF3) & original... | 0.15 | OrthoFinder output from all 47 species | |
| Mp3g09610.1 | No alias | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g20105 | YCF3 | protein involved in PS-I assembly *(YCF3) & original... | 0.1 | OrthoFinder output from all 47 species | |
| Pir_g08805 | YCF3 | protein involved in PS-I assembly *(YCF3) & original... | 0.12 | OrthoFinder output from all 47 species | |
| Sam_g21679 | No alias | protein involved in PS-I assembly *(YCF3) & original... | 0.07 | OrthoFinder output from all 47 species | |
| Solyc00g500058.1.1 | YCF3, Solyc00g500058 | YCF3 protein involved in PS-I assembly | 0.18 | OrthoFinder output from all 47 species | |
| Solyc00g500059.1.1 | Solyc00g500059 | Photosystem I assembly protein Ycf3 OS=Solanum... | 0.22 | OrthoFinder output from all 47 species | |
| Solyc00g500144.1.1 | Solyc00g500144 | Photosystem I assembly protein Ycf3 OS=Solanum... | 0.22 | OrthoFinder output from all 47 species | |
| Solyc00g500210.1.1 | YCF3, Solyc00g500210 | YCF3 protein involved in PS-I assembly | 0.18 | OrthoFinder output from all 47 species | |
| Solyc00g500211.1.1 | Solyc00g500211 | Photosystem I assembly protein Ycf3 OS=Solanum... | 0.22 | OrthoFinder output from all 47 species | |
| Solyc09g015280.1.1 | YCF3, Solyc09g015280 | Photosystem I assembly protein Ycf3 OS=Solanum... | 0.09 | OrthoFinder output from all 47 species | |
| Solyc09g015320.3.1 | PSAA, Solyc09g015320 | Photosystem I P700 chlorophyll a apoprotein A1... | 0.27 | OrthoFinder output from all 47 species | |
| Spa_g00949 | YCF3 | protein involved in PS-I assembly *(YCF3) & original... | 0.15 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009579 | thylakoid | IEP | HCCA |
| BP | GO:0009767 | photosynthetic electron transport chain | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| MF | GO:0016168 | chlorophyll binding | IEP | HCCA |
| BP | GO:0017004 | cytochrome complex assembly | IEP | HCCA |
| BP | GO:0019684 | photosynthesis, light reaction | IEP | HCCA |
| BP | GO:0022900 | electron transport chain | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | HCCA |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
| MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
