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  5. Ehy_g01666

Ehy_g01666 (DDB1A)


Aliases : DDB1A

Description : core adaptor component *(DDB1) of CUL4-based E3 ubiquitin ligase complexes & original description: none


Gene families : OG0004030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004030_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g01666
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AT4G05420 DDB1A damaged DNA binding protein 1A 0.03 OrthoFinder output from all 47 species
Adi_g015691 DDB1A core adaptor component *(DDB1) of CUL4-based E3... 0.02 OrthoFinder output from all 47 species
Adi_g114746 DDB1A core adaptor component *(DDB1) of CUL4-based E3... 0.03 OrthoFinder output from all 47 species
Als_g03248 DDB1A core adaptor component *(DDB1) of CUL4-based E3... 0.03 OrthoFinder output from all 47 species
Aop_g09805 DDB1A core adaptor component *(DDB1) of CUL4-based E3... 0.03 OrthoFinder output from all 47 species
Azfi_s0382.g067410 DDB1A core adaptor component *(DDB1) of CUL4-based E3... 0.04 OrthoFinder output from all 47 species
Azfi_s2185.g109819 DDB1A core adaptor component *(DDB1) of CUL4-based E3... 0.02 OrthoFinder output from all 47 species
Cba_g02733 DDB1A core adaptor component *(DDB1) of CUL4-based E3... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000851.24 DDB1A Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Cre10.g432000 DDB1A Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Dcu_g08979 DDB1A core adaptor component *(DDB1) of CUL4-based E3... 0.04 OrthoFinder output from all 47 species
Dde_g02981 DDB1A core adaptor component *(DDB1) of CUL4-based E3... 0.03 OrthoFinder output from all 47 species
LOC_Os01g40320.1 DDB1B, LOC_Os01g40320 DNA damage-binding protein 1 OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species
LOC_Os05g51480.1 DDB1A, LOC_Os05g51480 component DDB1 of UV-damaged DNA-binding protein... 0.04 OrthoFinder output from all 47 species
Len_g02426 DDB1A core adaptor component *(DDB1) of CUL4-based E3... 0.03 OrthoFinder output from all 47 species
Msp_g02097 DDB1A core adaptor component *(DDB1) of CUL4-based E3... 0.03 OrthoFinder output from all 47 species
Ore_g15533 DDB1A core adaptor component *(DDB1) of CUL4-based E3... 0.05 OrthoFinder output from all 47 species
Pir_g18367 DDB1A core adaptor component *(DDB1) of CUL4-based E3... 0.03 OrthoFinder output from all 47 species
Ppi_g02374 DDB1A core adaptor component *(DDB1) of CUL4-based E3... 0.02 OrthoFinder output from all 47 species
Sam_g12601 No alias core adaptor component *(DDB1) of CUL4-based E3... 0.02 OrthoFinder output from all 47 species
Smo145521 DDB1A Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Solyc02g021650.3.1 DDB1A, Solyc02g021650 component DDB1 of UV-damaged DNA-binding protein... 0.04 OrthoFinder output from all 47 species
Zm00001e026665_P002 DDB1A, Zm00001e026665 component DDB1 of UV-damaged DNA-binding protein... 0.04 OrthoFinder output from all 47 species
Zm00001e032569_P002 DDB1A, Zm00001e032569 component DDB1 of UV-damaged DNA-binding protein... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR018846 Cleavage/polyA-sp_fac_asu_N 77 537
IPR004871 Cleavage/polyA-sp_fac_asu_C 748 1060
No external refs found!