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  5. Ceric.30G027600.1

Ceric.30G027600.1 (Ceric.30G027600)


Aliases : Ceric.30G027600

Description : not classified & original description: pacid=50609466 polypeptide=Ceric.30G027600.1.p locus=Ceric.30G027600 ID=Ceric.30G027600.1.v2.1 annot-version=v2.1


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.30G027600.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Adi_g034668 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g03700 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09402 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g27603 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g70598 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28168.t1 Aspi01Gene28168 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G039400.1 Ceric.03G039400 not classified & original description: pacid=50571919... 0.01 OrthoFinder output from all 47 species
Ceric.06G014700.1 EMB2758, Ceric.06G014700 not classified & original description: pacid=50619889... 0.05 OrthoFinder output from all 47 species
Ceric.10G079400.1 CRR22, Ceric.10G079400 not classified & original description: pacid=50612332... 0.02 OrthoFinder output from all 47 species
Ceric.12G016200.1 Ceric.12G016200 not classified & original description: pacid=50601153... 0.01 OrthoFinder output from all 47 species
Ceric.29G060200.1 Ceric.29G060200 not classified & original description: pacid=50624987... 0.01 OrthoFinder output from all 47 species
Ceric.34G063100.1 Ceric.34G063100 not classified & original description: pacid=50623551... 0.01 OrthoFinder output from all 47 species
Ceric.34G070400.1 Ceric.34G070400 not classified & original description: pacid=50623393... 0.05 OrthoFinder output from all 47 species
Dcu_g38668 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g38682 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g22526 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g05447 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g08835 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g09168 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g54960 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g35930 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g23160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g47992 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03158 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g05446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05885 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g10208 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g15698 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g24704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30106 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g41721 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g57727 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48011 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo111894 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
Tin_g08446 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
CC GO:0009521 photosystem IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
MF GO:0016168 chlorophyll binding IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 428 456
IPR002885 Pentatricopeptide_repeat 398 424
IPR002885 Pentatricopeptide_repeat 122 150
IPR002885 Pentatricopeptide_repeat 92 118
IPR002885 Pentatricopeptide_repeat 628 674
IPR002885 Pentatricopeptide_repeat 219 267
IPR002885 Pentatricopeptide_repeat 16 62
IPR002885 Pentatricopeptide_repeat 322 368
IPR002885 Pentatricopeptide_repeat 729 777
IPR002885 Pentatricopeptide_repeat 525 573
No external refs found!