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  5. Ceric.32G008200.1

Ceric.32G008200.1 (ATSYP52, SYP52,...)


Aliases : ATSYP52, SYP52, Ceric.32G008200

Description : Qc-type SYP5-group component of SNARE membrane fusion complex & original description: pacid=50598454 polypeptide=Ceric.32G008200.1.p locus=Ceric.32G008200 ID=Ceric.32G008200.1.v2.1 annot-version=v2.1


Gene families : OG0001545 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001545_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.32G008200.1

Target Alias Description ECC score Gene Family Method Actions
Aob_g01445 ATSYP52, SYP52 Qc-type SYP5-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Azfi_s0327.g065240 ATSYP52, SYP52 Qc-type SYP5-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
LOC_Os02g02720.3 ATSYP52, SYP52,... SYP5 group Qc-type SNARE protein 0.02 OrthoFinder output from all 47 species
Lfl_g41096 ATSYP52, SYP52 Qc-type SYP5-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000387 spliceosomal snRNP assembly IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 177 228
No external refs found!