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  5. Ceric.32G066700.1

Ceric.32G066700.1 (GRP2, ATGRP2,...)


Aliases : GRP2, ATGRP2, GR-RBP2, Ceric.32G066700

Description : not classified & original description: pacid=50597731 polypeptide=Ceric.32G066700.1.p locus=Ceric.32G066700 ID=Ceric.32G066700.1.v2.1 annot-version=v2.1


Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.32G066700.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00114p00125610 evm_27.TU.AmTr_v1... Small RNA-binding protein 11, chloroplastic... 0.03 OrthoFinder output from all 47 species
AT1G18630 GR-RBP6 glycine-rich RNA-binding protein 6 0.03 OrthoFinder output from all 47 species
AT2G27330 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.06 OrthoFinder output from all 47 species
AT3G23830 GR-RBP4, GRP4 glycine-rich RNA-binding protein 4 0.05 OrthoFinder output from all 47 species
AT4G13850 GRP2, ATGRP2, GR-RBP2 glycine-rich RNA-binding protein 2 0.03 OrthoFinder output from all 47 species
Adi_g016848 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022151 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g040241 GR-RBP5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0468.g072856 GR-RBP4, GRP4 not classified & original description: CDS=1-582 0.03 OrthoFinder output from all 47 species
Cba_g38953 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03121 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g06493 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025527001 No alias Organelle RRM domain-containing protein 2, mitochondrial... 0.02 OrthoFinder output from all 47 species
Len_g21305 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436424g0010 ATRZ-1A RNA chaperone (RZ1|GR-RBP) 0.03 OrthoFinder output from all 47 species
MA_133527g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_77292g0010 No alias RNA editing factor (ORRM) 0.03 OrthoFinder output from all 47 species
Msp_g29443 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g46058 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12375 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c4_6610V3.1 GRP2, ATGRP2,... glycine-rich RNA-binding protein 3 0.02 OrthoFinder output from all 47 species
Sam_g25482 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo406315 GR-RBP4, GRP4 Glycine-rich RNA-binding protein 2, mitochondrial... 0.03 OrthoFinder output from all 47 species
Tin_g00653 GR-RBP5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04956 No alias RNA chaperone *(RZ1) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06526 No alias RNA chaperone *(RZ1) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27808 GR-RBP4, GRP4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30660 GR-RBP3 RNA ediTing factor *(ORRM3) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e028481_P002 GRP2, ATGRP2,... RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) 0.04 OrthoFinder output from all 47 species
Zm00001e040294_P001 Zm00001e040294 RNA editing factor (ORRM) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 85 154
No external refs found!