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  5. Ceric.33G023800.1

Ceric.33G023800.1 (YCF3, Ceric.33G023800)


Aliases : YCF3, Ceric.33G023800

Description : protein involved in PS-I assembly *(YCF3) & original description: pacid=50606760 polypeptide=Ceric.33G023800.1.p locus=Ceric.33G023800 ID=Ceric.33G023800.1.v2.1 annot-version=v2.1


Gene families : OG0006366 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006366_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.33G023800.1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Aev_g34996 YCF3 protein involved in PS-I assembly *(YCF3) & original... 0.09 OrthoFinder output from all 47 species
Ceric.1Z022600.1 YCF3, Ceric.1Z022600 protein involved in PS-I assembly *(YCF3) & original... 0.07 OrthoFinder output from all 47 species
Ceric.26G038300.1 YCF3, Ceric.26G038300 not classified & original description: pacid=50599550... 0.09 OrthoFinder output from all 47 species
Ceric.29G032800.1 YCF3, Ceric.29G032800 protein involved in PS-I assembly *(YCF3) & original... 0.09 OrthoFinder output from all 47 species
Ceric.31G008800.1 Ceric.31G008800 not classified & original description: pacid=50574640... 0.07 OrthoFinder output from all 47 species
GSVIVT01016018001 No alias Photosystem I assembly protein Ycf3 OS=Nicotiana tabacum 0.04 OrthoFinder output from all 47 species
LOC_Os01g57966.1 YCF3, LOC_Os01g57966 YCF3 protein involved in PS-I assembly 0.05 OrthoFinder output from all 47 species
LOC_Os04g16736.1 YCF3, LOC_Os04g16736 YCF3 protein involved in PS-I assembly 0.05 OrthoFinder output from all 47 species
LOC_Os04g16762.1 YCF3, LOC_Os04g16762 YCF3 protein involved in PS-I assembly 0.03 OrthoFinder output from all 47 species
LOC_Os10g21254.1 YCF3, LOC_Os10g21254 YCF3 protein involved in PS-I assembly 0.05 OrthoFinder output from all 47 species
LOC_Os10g38216.1 YCF3, LOC_Os10g38216 YCF3 protein involved in PS-I assembly 0.05 OrthoFinder output from all 47 species
Lfl_g14015 YCF3 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Lfl_g19607 YCF3 protein involved in PS-I assembly *(YCF3) & original... 0.12 OrthoFinder output from all 47 species
Ore_g20105 YCF3 protein involved in PS-I assembly *(YCF3) & original... 0.03 OrthoFinder output from all 47 species
Pir_g08805 YCF3 protein involved in PS-I assembly *(YCF3) & original... 0.06 OrthoFinder output from all 47 species
Sam_g21679 No alias protein involved in PS-I assembly *(YCF3) & original... 0.04 OrthoFinder output from all 47 species
Solyc00g500059.1.1 Solyc00g500059 Photosystem I assembly protein Ycf3 OS=Solanum... 0.07 OrthoFinder output from all 47 species
Solyc00g500144.1.1 Solyc00g500144 Photosystem I assembly protein Ycf3 OS=Solanum... 0.07 OrthoFinder output from all 47 species
Solyc00g500211.1.1 Solyc00g500211 Photosystem I assembly protein Ycf3 OS=Solanum... 0.07 OrthoFinder output from all 47 species
Solyc09g015280.1.1 YCF3, Solyc09g015280 Photosystem I assembly protein Ycf3 OS=Solanum... 0.06 OrthoFinder output from all 47 species
Solyc09g015320.3.1 PSAA, Solyc09g015320 Photosystem I P700 chlorophyll a apoprotein A1... 0.03 OrthoFinder output from all 47 species
Spa_g00949 YCF3 protein involved in PS-I assembly *(YCF3) & original... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005840 ribosome IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001440 TPR_1 73 102
No external refs found!