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  5. Ceric.34G041700.1

Ceric.34G041700.1 (PIF3, POC1, PAP3,...)


Aliases : PIF3, POC1, PAP3, Ceric.34G041700

Description : bHLH-type transcription factor & original description: pacid=50623221 polypeptide=Ceric.34G041700.1.p locus=Ceric.34G041700 ID=Ceric.34G041700.1.v2.1 annot-version=v2.1


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.34G041700.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00138470 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.03 OrthoFinder output from all 47 species
AMTR_s00045p00141060 PIF3, POC1,... External stimuli response.light.red/far red light.PIF... 0.03 OrthoFinder output from all 47 species
AT3G59060 PIL6, PIF5 phytochrome interacting factor 3-like 6 0.03 OrthoFinder output from all 47 species
AT4G00050 UNE10 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.1 OrthoFinder output from all 47 species
Adi_g007889 LRL1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g048072 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06685 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g39083 SPT bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g33578 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g04947 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05555 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01266.t1 SPT, Aspi01Gene01266 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene28459.t1 SPT, Aspi01Gene28459 bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0038.g026209 No alias bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Cba_g19851 SPT bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g60405 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11196 SPT bHLH-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g18718 SPT bHLH-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g08487 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g17520 PIL5, PIF1 bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01007914001 PIF7 RNA biosynthesis.transcriptional activation.bHLH... 0.07 OrthoFinder output from all 47 species
Len_g24250 SPT bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g39067 SPT bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g09011 SPT bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g11634 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02825 SPT bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g11202 SPT bHLH-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g50240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60433 SPT bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g66268 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g05994 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63750 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g090790.4.1 UNE10, Solyc01g090790 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Solyc07g043580.4.1 PIL6, PIF5,... transcription factor (bHLH). PIF red/far-red light... 0.06 OrthoFinder output from all 47 species
Tin_g27626 SPT bHLH-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g38881 SPT bHLH-type transcription factor & original description: none 0.09 OrthoFinder output from all 47 species
Zm00001e002331_P003 UNE10, Zm00001e002331 transcription factor (bHLH) 0.09 OrthoFinder output from all 47 species
Zm00001e005046_P003 PIL5, PIF1,... transcription factor (bHLH). PIF red/far-red light... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 315 361
No external refs found!