Ehy_g02057 (AtRABA1f, RABA1f)

Aliases : AtRABA1f, RABA1f

Description : A-class RAB GTPase & original description: none

Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ehy_g02057
Cluster	HCCA: Cluster_86

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00148p00100780	AtRABA5a,...	Ras-related protein RABA5a OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
AT1G28550	RABA1i, AtRABA1i	RAB GTPase homolog A1I	0.03	OrthoFinder output from all 47 species
AT2G33870	ArRABA1h	RAB GTPase homolog A1H	0.03	OrthoFinder output from all 47 species
AT5G45750	RABA1c, AtRABA1c	RAB GTPase homolog A1C	0.03	OrthoFinder output from all 47 species
Ala_g00731	AtRABA5d, RABA5d	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g30591	RABA2b,...	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Als_g08482	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g04921	AtRABA5a, RABA5a	A-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0056.g034200	AtRABA1f, RABA1f	A-class RAB GTPase & original description: CDS=99-740	0.04	OrthoFinder output from all 47 species
Azfi_s2632.g112466	ATRABA2A,...	A-class RAB GTPase & original description: CDS=274-942	0.03	OrthoFinder output from all 47 species
Ceric.34G031100.1	AtRABA1f,...	A-class RAB GTPase & original description:...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020961.97	AtRABA1e, RABA1e	Vesicle trafficking.regulation of membrane tethering and...	0.01	OrthoFinder output from all 47 species
Cre03.g189250	ATRABA2A,...	Vesicle trafficking.regulation of membrane tethering and...	0.01	OrthoFinder output from all 47 species
Dcu_g08021	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g40522	ATRABA2A,...	A-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os01g54590.1	ATRABA1B, RAB11,...	A-class RAB GTPase	0.02	OrthoFinder output from all 47 species
LOC_Os05g20050.1	RAB-A2C,...	A-class RAB GTPase	0.02	OrthoFinder output from all 47 species
LOC_Os09g15790.1	AtRABA1f,...	A-class RAB GTPase	0.04	OrthoFinder output from all 47 species
Len_g03672	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Len_g15896	ATRABA2A,...	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g23851	AtRABA5a, RABA5a	A-class RAB GTPase & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g16173	AtRABA5d, RABA5d	A-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g19758	ATRABA5C, ARA4,...	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g27644	AtRABA5a, RABA5a	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Smo146310	AtRABA1f, RABA1f	Vesicle trafficking.regulation of membrane tethering and...	0.02	OrthoFinder output from all 47 species
Solyc03g006270.3.1	AtRABA1f,...	A-class RAB GTPase	0.02	OrthoFinder output from all 47 species
Tin_g05879	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e020213_P001	AtRABA1f,...	A-class RAB GTPase	0.03	OrthoFinder output from all 47 species
Zm00001e033825_P001	AtRABA1f,...	A-class RAB GTPase	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
MF	GO:0051287	NAD binding	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	14	174

External Links

No external refs found!

Ehy_g02057 (AtRABA1f, RABA1f)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation