Aliases : Ceric.36G012600
Description : not classified & original description: pacid=50568766 polypeptide=Ceric.36G012600.1.p locus=Ceric.36G012600 ID=Ceric.36G012600.1.v2.1 annot-version=v2.1
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00004p00076010 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| AT4G13650 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g036805 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g059409 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g098996 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g36933 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g30090 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30905 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g04156 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g17248 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0035.g025575 | CRR2 | not classified & original description: CDS=1-1563 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0074.g037385 | OTP84 | not classified & original description: CDS=80-2584 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s1107.g097662 | No alias | not classified & original description: CDS=1-2811 | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001657.6 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g17043 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g23056 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g08184 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g08450 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g08671 | CRR22 | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g10089 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g04006 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g16747 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g22017 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g23030 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g23579 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g25114 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g26461 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g30238 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g47764 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01012461001 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g43420.1 | OSB1, LOC_Os03g43420 | ssDNA-binding protein (OSB) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g59264.1 | LOC_Os03g59264 | lectin chaperone (CRT) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g39410.1 | OTP86, LOC_Os04g39410 | RNA editing factor (OTP86) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g50950.1 | LOC_Os05g50950 | Pentatricopeptide repeat-containing protein At4g01030,... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g13990.1 | LOC_Os08g13990 | Pentatricopeptide repeat-containing protein At2g37320... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g24640.1 | REME1, LOC_Os09g24640 | Pentatricopeptide repeat-containing protein At2g36730... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g32453 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_5858185g0010 | No alias | Pentatricopeptide repeat-containing protein At4g30700... | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g04292 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g11487 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g22916 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Msp_g26329 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g16042 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g16805 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g27639 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g32189 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g39306 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g12578 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g17297 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g57989 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g17432 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53729 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0004.g002209 | No alias | not classified & original description: CDS=347-2416 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0009.g004577 | No alias | not classified & original description: CDS=1-1743 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g12533 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g33428 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g38450 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g006990.1.1 | Solyc03g006990 | Pentatricopeptide repeat-containing protein At5g66520... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g16937 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g17850 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g06092 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e029819_P003 | CRR22, Zm00001e029819 | RNA editing factor (CRR22) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 150 | 195 |
| IPR002885 | Pentatricopeptide_repeat | 352 | 399 |
| IPR002885 | Pentatricopeptide_repeat | 249 | 297 |
| IPR002885 | Pentatricopeptide_repeat | 556 | 602 |
| IPR002885 | Pentatricopeptide_repeat | 455 | 500 |
| IPR002885 | Pentatricopeptide_repeat | 123 | 142 |
| IPR002885 | Pentatricopeptide_repeat | 89 | 115 |
| IPR002885 | Pentatricopeptide_repeat | 630 | 654 |
| No external refs found! |
