Aliases : Ceric.36G042400
Description : component *(uL1c) of large plastid ribosomal-subunit proteome & original description: pacid=50568851 polypeptide=Ceric.36G042400.1.p locus=Ceric.36G042400 ID=Ceric.36G042400.1.v2.1 annot-version=v2.1
Gene families : OG0002232 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002232_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ceric.36G042400.1 | |
| Cluster | HCCA: Cluster_126 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00107p00035950 | evm_27.TU.AmTr_v1... | Protein biosynthesis.organelle translation... | 0.04 | OrthoFinder output from all 47 species | |
| AT3G63490 | No alias | Ribosomal protein L1p/L10e family | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g083284 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g11306 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Ala_g13358 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
| Aob_g31675 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g11179 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s0065.g035757 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Cba_g25894 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Cre02.g088900 | No alias | Protein biosynthesis.organelle translation... | 0.06 | OrthoFinder output from all 47 species | |
| Dac_g00779 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g06155 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g12366 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01032196001 | No alias | Protein biosynthesis.organelle translation... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_16169 | No alias | component psRPL1 of large ribosomal subunit proteome | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os05g32220.1 | LOC_Os05g32220 | component psRPL1 of large ribosomal subunit proteome | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g03897 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
| Lfl_g19309 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| MA_10002614g0010 | No alias | 50S ribosomal protein L1, chloroplastic OS=Arabidopsis... | 0.07 | OrthoFinder output from all 47 species | |
| MA_310797g0010 | No alias | 50S ribosomal protein L1, chloroplastic OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g07500.1 | No alias | component psRPL1 of large ribosomal subunit proteome | 0.15 | OrthoFinder output from all 47 species | |
| Msp_g12689 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g11958 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.14 | OrthoFinder output from all 47 species | |
| Ore_g28354 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c23_11170V3.1 | Pp3c23_11170 | Ribosomal protein L1p/L10e family | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g41124 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0154.g023589 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Sam_g13571 | No alias | component *(uL1m) of large mitoribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Smo143134 | No alias | Protein biosynthesis.organelle translation... | 0.08 | OrthoFinder output from all 47 species | |
| Spa_g16769 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.11 | OrthoFinder output from all 47 species | |
| Tin_g00638 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e031570_P001 | Zm00001e031570 | component psRPL1 of large ribosomal subunit proteome | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004751 | ribose-5-phosphate isomerase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0005261 | monoatomic cation channel activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
| BP | GO:0009052 | pentose-phosphate shunt, non-oxidative branch | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015252 | proton channel activity | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
| MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | HCCA |
| MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
| MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | HCCA |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR028364 | Ribosomal_L1/biogenesis | 142 | 332 |
| No external refs found! |
