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  5. Ceric.37G012300.1

Ceric.37G012300.1 (PAB2, PABP2, ATPAB2,...)


Aliases : PAB2, PABP2, ATPAB2, Ceric.37G012300

Description : mRNA poly-A-tail binding factor *(PABP) & original description: pacid=50615854 polypeptide=Ceric.37G012300.1.p locus=Ceric.37G012300 ID=Ceric.37G012300.1.v2.1 annot-version=v2.1


Gene families : OG0000326 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000326_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Ceric.37G012300.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g023675 PAB2, PABP2, ATPAB2 mRNA poly-A-tail binding factor *(PABP) & original... 0.03 OrthoFinder output from all 47 species
Adi_g075125 PAB2, PABP2, ATPAB2 mRNA poly-A-tail binding factor *(PABP) & original... 0.03 OrthoFinder output from all 47 species
Adi_g088081 PAB2, PABP2, ATPAB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02254 PAB2, PABP2, ATPAB2 mRNA poly-A-tail binding factor *(PABP) & original... 0.03 OrthoFinder output from all 47 species
Cba_g10012 PAB2, PABP2, ATPAB2 mRNA poly-A-tail binding factor *(PABP) & original... 0.02 OrthoFinder output from all 47 species
Cba_g17293 PAB2, PABP2, ATPAB2 mRNA poly-A-tail binding factor *(PABP) & original... 0.02 OrthoFinder output from all 47 species
Ceric.36G019600.1 PAB2, PABP2,... mRNA poly-A-tail binding factor *(PABP) & original... 0.04 OrthoFinder output from all 47 species
Dac_g14175 PAB2, PABP2, ATPAB2 mRNA poly-A-tail binding factor *(PABP) & original... 0.02 OrthoFinder output from all 47 species
Dde_g03420 PAB2, PABP2, ATPAB2 mRNA poly-A-tail binding factor *(PABP) & original... 0.04 OrthoFinder output from all 47 species
Gb_00731 PAB2, PABP2, ATPAB2 mRNA poly-A-tail binding factor (PABP) 0.04 OrthoFinder output from all 47 species
MA_10436565g0010 PAB2, PABP2, ATPAB2 mRNA poly-A-tail binding factor (PABP) 0.03 OrthoFinder output from all 47 species
MA_111003g0010 PAB2, PABP2, ATPAB2 mRNA poly-A-tail binding factor (PABP) 0.03 OrthoFinder output from all 47 species
Msp_g09660 PAB2, PABP2, ATPAB2 mRNA poly-A-tail binding factor *(PABP) & original... 0.03 OrthoFinder output from all 47 species
Pir_g08773 PAB2, PABP2, ATPAB2 mRNA poly-A-tail binding factor *(PABP) & original... 0.03 OrthoFinder output from all 47 species
Pir_g19027 PAB2, PABP2, ATPAB2 mRNA poly-A-tail binding factor *(PABP) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g10451 PAB2, PABP2, ATPAB2 mRNA poly-A-tail binding factor *(PABP) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g18527 PAB2, PABP2, ATPAB2 mRNA poly-A-tail binding factor *(PABP) & original... 0.03 OrthoFinder output from all 47 species
Sam_g24380 No alias mRNA poly-A-tail binding factor *(PABP) & original... 0.02 OrthoFinder output from all 47 species
Solyc12g088720.2.1 PAB2, PABP2,... mRNA poly-A-tail binding factor (PABP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEP HCCA
InterPro domains Description Start Stop
IPR002004 PABP_HYD 559 623
IPR000504 RRM_dom 311 379
IPR000504 RRM_dom 29 98
IPR000504 RRM_dom 208 276
IPR000504 RRM_dom 117 185
No external refs found!