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  5. Ceric.37G069500.1

Ceric.37G069500.1 (TCP2, Ceric.37G069500)


Aliases : TCP2, Ceric.37G069500

Description : TCP-type transcription factor & original description: pacid=50615775 polypeptide=Ceric.37G069500.1.p locus=Ceric.37G069500 ID=Ceric.37G069500.1.v2.1 annot-version=v2.1


Gene families : OG0000529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000529_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.37G069500.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AT3G02150 TCP13, TFPD, PTF1 plastid transcription factor 1 0.02 OrthoFinder output from all 47 species
Aev_g30836 TCP10 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene27741.t1 TCP2, Aspi01Gene27741 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008234001 TCP12, BRC2 RNA biosynthesis.transcriptional activation.TCP... 0.04 OrthoFinder output from all 47 species
GSVIVT01036449001 TCP1 RNA biosynthesis.transcriptional activation.TCP... 0.04 OrthoFinder output from all 47 species
Gb_30049 TCP2 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Gb_38376 TCP2 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
MA_4774g0010 TCP2 transcription factor (TCP) 0.05 OrthoFinder output from all 47 species
MA_52440g0010 TCP4, MEE35 transcription factor (TCP) 0.06 OrthoFinder output from all 47 species
Pnu_g26630 TCP2 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g26727 TCP13, TFPD, PTF1 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02212 TCP3 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0168.g024243 TCP2 TCP-type transcription factor & original description: CDS=1-1395 0.03 OrthoFinder output from all 47 species
Smo89227 TCP2 RNA biosynthesis.transcriptional activation.TCP... 0.04 OrthoFinder output from all 47 species
Solyc06g069460.3.1 TCP5, Solyc06g069460 transcription factor (TCP) 0.06 OrthoFinder output from all 47 species
Solyc07g053410.4.1 TCP4, MEE35,... transcription factor (TCP) 0.07 OrthoFinder output from all 47 species
Zm00001e005407_P001 TCP12, BRC2,... transcription factor (TCP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 48 146
No external refs found!