Aliases : YCF4, Ceric.38G006800
Description : protein involved in PS-I assembly *(YCF4) & original description: pacid=50580405 polypeptide=Ceric.38G006800.1.p locus=Ceric.38G006800 ID=Ceric.38G006800.1.v2.1 annot-version=v2.1
Gene families : OG0009318 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009318_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ceric.38G006800.1 | |
| Cluster | HCCA: Cluster_43 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s02490p00007250 | YCF4,... | Photosystem I assembly protein Ycf4 OS=Amborella trichopoda | 0.09 | OrthoFinder output from all 47 species | |
| ATCG00520 | YCF4 | unfolded protein binding | 0.34 | OrthoFinder output from all 47 species | |
| Aev_g15963 | YCF4 | protein involved in PS-I assembly *(YCF4) & original... | 0.33 | OrthoFinder output from all 47 species | |
| Aob_g29003 | YCF4 | protein involved in PS-I assembly *(YCF4) & original... | 0.16 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000196 | No alias | not classified & original description: CDS=1-402 | 0.08 | OrthoFinder output from all 47 species | |
| Ceric.29G033700.1 | YCF4, Ceric.29G033700 | protein involved in PS-I assembly *(YCF4) & original... | 0.09 | OrthoFinder output from all 47 species | |
| GSVIVT01030619001 | YCF4 | Photosystem I assembly protein Ycf4 OS=Vitis vinifera | 0.11 | OrthoFinder output from all 47 species | |
| Gb_22391 | YCF4 | YCF4 protein involved in PS-I assembly | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os01g58049.1 | LOC_Os01g58049 | YCF4 protein involved in PS-I assembly | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os02g24604.1 | YCF4, LOC_Os02g24604 | YCF4 protein involved in PS-I assembly | 0.3 | OrthoFinder output from all 47 species | |
| LOC_Os06g39744.1 | YCF4, LOC_Os06g39744 | YCF4 protein involved in PS-I assembly | 0.29 | OrthoFinder output from all 47 species | |
| MA_36633g0010 | No alias | Photosystem I assembly protein Ycf4 OS=Pinus koraiensis... | 0.05 | OrthoFinder output from all 47 species | |
| Mpzg00380.1 | YCF4 | YCF4 protein involved in PS-I assembly | 0.03 | OrthoFinder output from all 47 species | |
| Solyc00g500019.1.1 | YCF4, Solyc00g500019 | Photosystem I assembly protein Ycf4 OS=Solanum tuberosum... | 0.24 | OrthoFinder output from all 47 species | |
| Solyc00g500066.1.1 | YCF4, Solyc00g500066 | Photosystem I assembly protein Ycf4 OS=Solanum tuberosum... | 0.14 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0009522 | photosystem I | IEA | Interproscan |
| CC | GO:0009579 | thylakoid | IEA | Interproscan |
| BP | GO:0015979 | photosynthesis | IEA | Interproscan |
| CC | GO:0016020 | membrane | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
| BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
| CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | HCCA |
| CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | HCCA |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003359 | PSI_Ycf4_assembly | 9 | 184 |
| No external refs found! |
