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  5. Ceric.38G045700.1

Ceric.38G045700.1 (RAB1C, ATRAB1C,...)


Aliases : RAB1C, ATRAB1C, ATRABD2C, Ceric.38G045700

Description : D-class RAB GTPase & original description: pacid=50580099 polypeptide=Ceric.38G045700.1.p locus=Ceric.38G045700 ID=Ceric.38G045700.1.v2.1 annot-version=v2.1


Gene families : OG0001129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001129_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.38G045700.1

Target Alias Description ECC score Gene Family Method Actions
AT4G17530 RAB1C, ATRAB1C, ATRABD2C RAB GTPase homolog 1C 0.05 OrthoFinder output from all 47 species
Adi_g105164 RAB1C, ATRAB1C, ATRABD2C D-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01035 ATRAB1A, ATRABD2B, RAB1A D-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09984 ATRAB1B, RABD2A,... D-class RAB GTPase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene62085.t2 ATRAB1B, RABD2A,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0028.g023798 RAB1C, ATRAB1C, ATRABD2C not classified & original description: CDS=1-543 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000455.18 RAB1C, ATRAB1C, ATRABD2C Ras-related protein RABD2c OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre12.g560150 ATRAB1A, ATRABD2B, RAB1A Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
Dcu_g23024 RAB1C, ATRAB1C, ATRABD2C D-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g31403 RAB1C, ATRAB1C, ATRABD2C not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_15477 ATRAB1B, RABD2A,... D-class RAB GTPase 0.05 OrthoFinder output from all 47 species
LOC_Os01g08450.1 ATRAB1B, RABD2A,... D-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Len_g10682 ATRAB1A, ATRABD2B, RAB1A D-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Mp3g00710.1 ATRAB1A, ATRABD2B, RAB1A D-class RAB GTPase 0.04 OrthoFinder output from all 47 species
Msp_g46440 ATRAB1A, ATRABD2B, RAB1A D-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g40698 ATRAB1B, RABD2A,... D-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02690 ATRAB1A, ATRABD2B, RAB1A D-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12317 ATRAB1B, RABD2A,... D-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0127.g021845 ATRAB1A, ATRABD2B, RAB1A not classified & original description: CDS=550-1089 0.03 OrthoFinder output from all 47 species
Solyc01g103370.3.1 ATFP8, RABD1,... D-class RAB GTPase 0.04 OrthoFinder output from all 47 species
Solyc05g053940.3.1 ATRAB1B, RABD2A,... D-class RAB GTPase 0.04 OrthoFinder output from all 47 species
Tin_g23605 RAB1C, ATRAB1C, ATRABD2C D-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e027735_P001 RAB1C, ATRAB1C,... D-class RAB GTPase 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001806 Small_GTPase 10 170
No external refs found!