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  5. Ceric.38G068100.1

Ceric.38G068100.1 (MSL5, Ceric.38G068100)


Aliases : MSL5, Ceric.38G068100

Description : mechanosensitive ion channel *(MSL) & original description: pacid=50579617 polypeptide=Ceric.38G068100.1.p locus=Ceric.38G068100 ID=Ceric.38G068100.1.v2.1 annot-version=v2.1


Gene families : OG0000689 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000689_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.38G068100.1
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
AT2G17010 No alias Mechanosensitive ion channel family protein 0.04 OrthoFinder output from all 47 species
Aev_g29476 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15328 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene20698.t1 MSL5, Aspi01Gene20698 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Cre12.g505800 MSL10, ATMSL10 Solute transport.channels.MSL mechanosensitive ion channel 0.01 OrthoFinder output from all 47 species
Dac_g12993 MSL6 mechanosensitive ion channel *(MSL) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g09577 MSL10, ATMSL10 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09666 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10976 MSL4 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11793 MSL6 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29706 MSL10, ATMSL10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g32324 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01023963001 MSL6 Solute transport.channels.MSL mechanosensitive ion channel 0.04 OrthoFinder output from all 47 species
GSVIVT01035448001 MSL10, ATMSL10 Solute transport.channels.MSL mechanosensitive ion channel 0.04 OrthoFinder output from all 47 species
MA_10428116g0010 MSL10, ATMSL10 mechanosensitive ion channel (MSL) 0.04 OrthoFinder output from all 47 species
Nbi_g07829 MSL6 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29070 ATHSP70, HSP70 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g28577 MSL4 mechanosensitive ion channel *(MSL) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007259_P002 Zm00001e007259 mechanosensitive ion channel (MSL) 0.03 OrthoFinder output from all 47 species
Zm00001e041490_P001 Zm00001e041490 mechanosensitive ion channel (MSL) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
InterPro domains Description Start Stop
IPR006685 MscS_channel 580 784
No external refs found!