Ceric.39G018000.1 (Ceric.39G018000)


Aliases : Ceric.39G018000

Description : not classified & original description: pacid=50583390 polypeptide=Ceric.39G018000.1.p locus=Ceric.39G018000 ID=Ceric.39G018000.1.v2.1 annot-version=v2.1


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.39G018000.1
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
Adi_g005602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034956 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056922 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g35621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07162 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g34282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g36669 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g39230 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g008059 No alias not classified & original description: CDS=1-504 0.02 OrthoFinder output from all 47 species
Cba_g06022 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G045800.1 Ceric.02G045800 not classified & original description: pacid=50584171... 0.04 OrthoFinder output from all 47 species
Ceric.05G093000.1 Ceric.05G093000 not classified & original description: pacid=50577993... 0.02 OrthoFinder output from all 47 species
Ceric.10G079400.1 CRR22, Ceric.10G079400 not classified & original description: pacid=50612332... 0.06 OrthoFinder output from all 47 species
Ceric.16G079900.1 Ceric.16G079900 not classified & original description: pacid=50589742... 0.04 OrthoFinder output from all 47 species
Dcu_g21452 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g43298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g15725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g14705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07853 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41129 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41395 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g46446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04976 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53489 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 138 185
IPR002885 Pentatricopeptide_repeat 37 83
IPR002885 Pentatricopeptide_repeat 11 35
IPR002885 Pentatricopeptide_repeat 113 135
IPR046848 E_motif 258 298
No external refs found!