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  5. Azfi_s0001.g000396

Azfi_s0001.g000396


Description : not classified & original description: CDS=1-2745


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0001.g000396

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00087430 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
AT5G43790 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g012988 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g024957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g059409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g095461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g109057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16602 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36549 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04216 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14757 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19114 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47255 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09923 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g26963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26992 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28223 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13134 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene04772.t1 CRR22, Aspi01Gene04772 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56180.t1 EMB2758, Aspi01Gene56180 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69669.t1 CRR22, Aspi01Gene69669 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0004.g008648 No alias not classified & original description: CDS=1-2118 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011300 No alias not classified & original description: CDS=1-2337 0.03 OrthoFinder output from all 47 species
Azfi_s0035.g025565 No alias not classified & original description: CDS=1-3945 0.04 OrthoFinder output from all 47 species
Azfi_s0090.g042642 No alias not classified & original description: CDS=39-695 0.02 OrthoFinder output from all 47 species
Azfi_s0117.g046569 No alias not classified & original description: CDS=1-2520 0.02 OrthoFinder output from all 47 species
Azfi_s0221.g058730 No alias not classified & original description: CDS=1-747 0.02 OrthoFinder output from all 47 species
Azfi_s0292.g063377 OTP86 not classified & original description: CDS=1-2337 0.02 OrthoFinder output from all 47 species
Cba_g04690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12399 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34541 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G010600.1 CRR22, Ceric.09G010600 ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.1Z254100.1 Ceric.1Z254100 not classified & original description: pacid=50632850... 0.02 OrthoFinder output from all 47 species
Ceric.27G010800.1 Ceric.27G010800 not classified & original description: pacid=50606194... 0.04 OrthoFinder output from all 47 species
Dac_g35435 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g45717 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03759 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12504 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g17110 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g37501 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g38857 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g39406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g49213 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g06677 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22836 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25013 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07460 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20638 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29669 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011333001 SLO1 Pentatricopeptide repeat-containing protein At1g08070,... 0.04 OrthoFinder output from all 47 species
GSVIVT01029254001 OSB4 RNA biosynthesis.organelle machineries.RNA polymerase... 0.02 OrthoFinder output from all 47 species
GSVIVT01029382001 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os01g60250.1 LOC_Os01g60250 Pentatricopeptide repeat-containing protein At3g14730... 0.03 OrthoFinder output from all 47 species
LOC_Os04g51350.1 LOC_Os04g51350 RNA editing factor (AEF1) 0.03 OrthoFinder output from all 47 species
LOC_Os05g50950.1 LOC_Os05g50950 Pentatricopeptide repeat-containing protein At4g01030,... 0.02 OrthoFinder output from all 47 species
LOC_Os06g40860.1 LOC_Os06g40860 Pentatricopeptide repeat-containing protein At1g03540... 0.02 OrthoFinder output from all 47 species
LOC_Os07g07620.1 emb1899, EMB175,... Pentatricopeptide repeat-containing protein At5g03800... 0.03 OrthoFinder output from all 47 species
LOC_Os10g39460.2 LOC_Os10g39460 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Len_g04593 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g05370 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05436 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05734 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15174 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g28067 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37802 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_27726g0010 VAC1, ECB2, ATECB2 RNA editing factor (ECB2/VAC1) 0.02 OrthoFinder output from all 47 species
MA_7379g0020 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_8319g0010 CRR2 Pentatricopeptide repeat-containing protein At3g24000,... 0.02 OrthoFinder output from all 47 species
MA_8893194g0010 MEF1 RNA editing factor (MEF1) 0.02 OrthoFinder output from all 47 species
Msp_g03543 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g16214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17452 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g34215 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g43134 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48694 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27841 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g44509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g21816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03413 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g27236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18774 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g22600 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12921 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13334 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53962 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59330 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007041 No alias ssDNA-binding protein *(OSB) & original description: CDS=241-3261 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014482 No alias not classified & original description: CDS=1-1119 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014790 No alias not classified & original description: CDS=1-2049 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018323 No alias not classified & original description: CDS=1-1728 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0129.g021978 No alias not classified & original description: CDS=1-2700 0.03 OrthoFinder output from all 47 species
Sam_g27497 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36251 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51263 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo81279 EMB2261 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Smo96927 EMB2758 Pentatricopeptide repeat-containing protein At3g24000,... 0.03 OrthoFinder output from all 47 species
Solyc03g119950.1.1 VAC1, ECB2,... RNA editing factor (ECB2/VAC1) 0.04 OrthoFinder output from all 47 species
Solyc07g062820.1.1 Solyc07g062820 RNA editing factor (SEL1/PDM1) 0.03 OrthoFinder output from all 47 species
Solyc10g005090.3.1 Solyc10g005090 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Spa_g21818 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g55537 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09854 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30121 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g46155 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e034445_P001 LPA66, Zm00001e034445 Pentatricopeptide repeat-containing protein At5g48910... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
CC GO:0031011 Ino80 complex IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
CC GO:0070603 SWI/SNF superfamily-type complex IEP HCCA
CC GO:0097346 INO80-type complex IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 502 528
IPR002885 Pentatricopeptide_repeat 704 730
IPR002885 Pentatricopeptide_repeat 805 828
IPR002885 Pentatricopeptide_repeat 301 321
IPR002885 Pentatricopeptide_repeat 531 560
IPR002885 Pentatricopeptide_repeat 767 793
IPR002885 Pentatricopeptide_repeat 199 220
IPR002885 Pentatricopeptide_repeat 631 661
IPR002885 Pentatricopeptide_repeat 603 629
IPR002885 Pentatricopeptide_repeat 124 170
IPR002885 Pentatricopeptide_repeat 325 373
IPR002885 Pentatricopeptide_repeat 225 271
IPR002885 Pentatricopeptide_repeat 427 475
No external refs found!