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  5. Ehy_g02398

Ehy_g02398


Description : not classified & original description: none


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g02398

Target Alias Description ECC score Gene Family Method Actions
AT1G21960 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G29840 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G40830 RHC1A RING-H2 finger C1A 0.03 OrthoFinder output from all 47 species
AT3G13430 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g012553 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Adi_g014381 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Adi_g017038 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g085324 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aev_g01231 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g03172 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g05398 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ala_g04888 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13947 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g21468 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ala_g26879 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Als_g22643 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g44017 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46210 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g47639 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g05181 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Aob_g12129 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aop_g08880 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aop_g14605 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g29180 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene58136.t1 Aspi01Gene58136 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58651.t1 Aspi01Gene58651 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g010490 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Azfi_s0038.g026224 No alias not classified & original description: CDS=1-687 0.02 OrthoFinder output from all 47 species
Ceric.02G061800.1 Ceric.02G061800 RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.14G083100.1 Ceric.14G083100 not classified & original description: pacid=50633279... 0.09 OrthoFinder output from all 47 species
Ceric.16G066200.1 Ceric.16G066200 RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.06 OrthoFinder output from all 47 species
Ceric.23G058400.1 Ceric.23G058400 not classified & original description: pacid=50610018... 0.01 OrthoFinder output from all 47 species
Ceric.32G049400.1 Ceric.32G049400 not classified & original description: pacid=50598110... 0.03 OrthoFinder output from all 47 species
Dac_g07739 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g13373 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g13726 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dcu_g03848 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Dcu_g32754 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02237 ATCRT1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08256 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51480 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01127 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g01134 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g01160 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g11152 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g14500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019972001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Gb_22124 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.04 OrthoFinder output from all 47 species
Gb_22125 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os03g59760.1 ATCRT1, LOC_Os03g59760 E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
LOC_Os06g42700.1 LOC_Os06g42700 E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os08g38060.1 LOC_Os08g38060 E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g22017 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05536 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Lfl_g11310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_413614g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_619596g0010 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.02 OrthoFinder output from all 47 species
Mp7g15970.1 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g10979 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Nbi_g13707 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g03817 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ore_g15069 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g41837 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g41838 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g44777 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Pir_g01325 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09671 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g23756 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Pir_g24146 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g24945 CIP8 RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Pir_g29204 RHC1A RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g40250 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g52386 No alias E3 ubiquitin ligase *(SNIPER) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11589 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ppi_g00999 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002229 No alias not classified & original description: CDS=1-1332 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008140 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020256 No alias not classified & original description: CDS=1-1698 0.03 OrthoFinder output from all 47 species
Sam_g05103 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g06799 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Sam_g14669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo18753 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Spa_g06543 RHC1A not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g12997 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g20368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21325 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g08969 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g14563 No alias RING-H2-class BTL-subclass E3 ubiquiTin ligase &... 0.03 OrthoFinder output from all 47 species
Zm00001e003411_P001 Zm00001e003411 E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e016135_P001 Zm00001e016135 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e030803_P001 Zm00001e030803 Probable E3 ubiquitin-protein ligase RHC1A... 0.02 OrthoFinder output from all 47 species
Zm00001e038273_P001 Zm00001e038273 E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 225 267
No external refs found!