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  5. Azfi_s0001.g000844

Azfi_s0001.g000844


Description : not classified & original description: CDS=1-1557


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0001.g000844

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272900 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
AMTR_s02193p00008230 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g02330,... 0.03 OrthoFinder output from all 47 species
AT4G19191 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g004502 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g035616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036802 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g32785 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g05709 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26965 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g27895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07902 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene10966.t1 Aspi01Gene10966 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16353.t1 Aspi01Gene16353 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28168.t1 Aspi01Gene28168 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34780.t1 Aspi01Gene34780 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45825.t1 Aspi01Gene45825 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67429.t1 Aspi01Gene67429 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene70770.t1 Aspi01Gene70770 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0043.g027128 No alias not classified & original description: CDS=146-1684 0.05 OrthoFinder output from all 47 species
Azfi_s0059.g034645 No alias not classified & original description: CDS=1-2358 0.06 OrthoFinder output from all 47 species
Azfi_s0059.g034666 No alias not classified & original description: CDS=1-1770 0.04 OrthoFinder output from all 47 species
Azfi_s0093.g043166 No alias not classified & original description: CDS=1-1980 0.04 OrthoFinder output from all 47 species
Azfi_s0125.g048584 CRR22 not classified & original description: CDS=1-1611 0.06 OrthoFinder output from all 47 species
Ceric.04G079600.1 OTP84, Ceric.04G079600 not classified & original description: pacid=50631214... 0.04 OrthoFinder output from all 47 species
Ceric.04G097800.1 Ceric.04G097800 not classified & original description: pacid=50631082... 0.03 OrthoFinder output from all 47 species
Ceric.11G042100.1 EMB2758, Ceric.11G042100 not classified & original description: pacid=50596851... 0.06 OrthoFinder output from all 47 species
Ceric.25G011600.1 Ceric.25G011600 not classified & original description: pacid=50594012... 0.03 OrthoFinder output from all 47 species
Ceric.27G067100.1 CRR22, Ceric.27G067100 not classified & original description: pacid=50605115... 0.05 OrthoFinder output from all 47 species
Ceric.30G012500.1 Ceric.30G012500 not classified & original description: pacid=50608997... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001038.5 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g30474 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07128 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21990 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23363 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g12280 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13325 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17712 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19509 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24574 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_27891 OTP86 RNA editing factor (OTP86) 0.02 OrthoFinder output from all 47 species
LOC_Os03g58100.1 OTP85, LOC_Os03g58100 RNA editing factor (OTP85) 0.05 OrthoFinder output from all 47 species
LOC_Os04g58980.1 LOC_Os04g58980 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os05g24150.1 LOC_Os05g24150 Pentatricopeptide repeat-containing protein At2g34400... 0.03 OrthoFinder output from all 47 species
Len_g04264 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18261 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18300 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24399 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g30844 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g47762 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g04922 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_102449g0020 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 OrthoFinder output from all 47 species
Msp_g03763 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g31656 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g35725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15698 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g12824 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g60343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10335 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18941 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g54615 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000685 No alias not classified & original description: CDS=1-2475 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005946 No alias not classified & original description: CDS=1-1029 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011872 No alias not classified & original description: CDS=1-2532 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0153.g023530 CRR22 not classified & original description: CDS=1-2073 0.03 OrthoFinder output from all 47 species
Sam_g06558 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13764 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13178 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g23468 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e013166_P001 Zm00001e013166 Pentatricopeptide repeat-containing protein At4g14820... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 191 235
IPR046848 E_motif 333 393
IPR032867 DYW_dom 426 517
IPR002885 Pentatricopeptide_repeat 289 313
IPR002885 Pentatricopeptide_repeat 252 279
No external refs found!