Aliases : GATA4
Description : transcription factor *(A/B-GATA) & original description: none
Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ehy_g02516 | |
| Cluster | HCCA: Cluster_10 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g066480 | GATA23 | transcription factor *(A/B-GATA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g076499 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0061.g034964 | GATA5 | transcription factor *(A/B-GATA) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Cre10.g435450 | GATA1 | RNA biosynthesis.transcriptional activation.C2C2... | 0.01 | OrthoFinder output from all 47 species | |
| Ehy_g21727 | GATA1 | transcription factor *(A/B-GATA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_103421g0030 | GATA5 | transcription factor (GATA) | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g14479 | GNC, GATA21 | transcription factor *(A/B-GATA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g07644 | No alias | transcription factor *(A/B-GATA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g23914 | No alias | transcription factor *(A/B-GATA) & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
| MF | GO:0043565 | sequence-specific DNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
| MF | GO:0004506 | squalene monooxygenase activity | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
| CC | GO:0016592 | mediator complex | IEP | HCCA |
| MF | GO:0016709 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000679 | Znf_GATA | 168 | 199 |
| No external refs found! |
