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  5. Azfi_s0003.g007690

Azfi_s0003.g007690


Description : GARP subgroup PHL transcription factor & original description: CDS=1-1080


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0003.g007690
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AT4G13640 UNE16 Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g017665 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g025472 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g052692 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g078895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39180 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32964.t1 Aspi01Gene32964 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g03918 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g16380 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.21G076700.1 Ceric.21G076700 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g09607 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g17436 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ehy_g06852 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
LOC_Os06g45890.1 LOC_Os06g45890 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os09g12770.1 LOC_Os09g12770 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
Lfl_g05530 PHL1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Lfl_g32204 KAN2 KANADI-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_10432937g0010 KAN4, ATS G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Mp4g01560.1 No alias G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Mp4g07330.1 No alias G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Msp_g22383 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g03399 PHL1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g28434 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g066340.4.1 KAN2, Solyc06g066340 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Spa_g04247 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g10529 KAN, KAN1 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22319 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g51060 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Tin_g12933 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e007231_P002 Zm00001e007231 Putative Myb family transcription factor At1g14600... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004392 heme oxygenase (decyclizing) activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006788 heme oxidation IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 181 226
IPR001005 SANT/Myb 101 151
No external refs found!