Azfi_s0004.g008405


Description : not classified & original description: CDS=233-2125


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0004.g008405

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00083p00015670 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
AT3G05240 MEF19 mitochondrial editing factor 19 0.03 OrthoFinder output from all 47 species
AT3G08820 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g024727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g057083 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067920 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g089076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g108176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18040 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g23642 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g28308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10792 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15532 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30309 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g59722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27006 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27809 MEF21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28421 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13883.t1 Aspi01Gene13883 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene31801.t1 Aspi01Gene31801 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0045.g030112 No alias not classified & original description: CDS=94-318 0.02 OrthoFinder output from all 47 species
Azfi_s0059.g034666 No alias not classified & original description: CDS=1-1770 0.04 OrthoFinder output from all 47 species
Cba_g06580 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G121800.1 Ceric.01G121800 not classified & original description: pacid=50593016... 0.02 OrthoFinder output from all 47 species
Ceric.07G081900.1 Ceric.07G081900 not classified & original description: pacid=50627936... 0.04 OrthoFinder output from all 47 species
Ceric.10G029900.1 Ceric.10G029900 not classified & original description: pacid=50612941... 0.03 OrthoFinder output from all 47 species
Ceric.18G024700.1 Ceric.18G024700 not classified & original description: pacid=50621916... 0.03 OrthoFinder output from all 47 species
Ceric.31G044700.1 Ceric.31G044700 not classified & original description: pacid=50574022... 0.04 OrthoFinder output from all 47 species
Dac_g33204 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05644 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05745 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06464 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07741 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07981 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11917 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g16664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16948 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21480 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g22538 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g23388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g23685 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26854 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g35769 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g37149 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g40877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40897 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47670 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50137 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g50973 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g15900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21750 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g22835 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008715001 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.02 OrthoFinder output from all 47 species
Gb_17092 CRR22 RNA editing factor (OTP82) 0.03 OrthoFinder output from all 47 species
LOC_Os01g27650.1 LOC_Os01g27650 Pentatricopeptide repeat-containing protein At2g33680... 0.03 OrthoFinder output from all 47 species
LOC_Os06g49185.1 LOC_Os06g49185 Pentatricopeptide repeat-containing protein At3g03580... 0.02 OrthoFinder output from all 47 species
LOC_Os12g01850.1 LOC_Os12g01850 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Len_g17706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10257685g0010 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
MA_107723g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
MA_1109g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 OrthoFinder output from all 47 species
MA_114722g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_11765g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_124907g0010 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
MA_14659g0010 OTP84 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_16339g0010 CRR2 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
MA_20782g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 OrthoFinder output from all 47 species
MA_480955g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_79624g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
MA_8491g0010 CRR2 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_935792g0010 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.02 OrthoFinder output from all 47 species
Msp_g14847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28518 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48594 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03158 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g19044 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12395 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12984 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16422 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g32537 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g17077 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05926 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06822 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11096 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13334 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32530 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53028 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53194 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g58118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59317 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0072.g016959 No alias not classified & original description: CDS=1-1596 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0134.g022300 CRR22 not classified & original description: CDS=1-1791 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0142.g022846 No alias not classified & original description: CDS=1-2226 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0151.g023411 REME1 not classified & original description: CDS=1-1494 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0243.g026662 No alias not classified & original description: CDS=264-2522 0.03 OrthoFinder output from all 47 species
Sam_g13564 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g21944 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g30277 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g34092 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35469 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35736 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g098480.3.1 Solyc01g098480 Pentatricopeptide repeat-containing protein At2g21090... 0.04 OrthoFinder output from all 47 species
Solyc02g011680.4.1 Solyc02g011680 Pentatricopeptide repeat-containing protein At5g27110... 0.02 OrthoFinder output from all 47 species
Solyc02g065030.1.1 EMB2758, Solyc02g065030 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Solyc03g098420.3.1 Solyc03g098420 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc06g048900.1.1 Solyc06g048900 Pentatricopeptide repeat-containing protein At2g40720... 0.03 OrthoFinder output from all 47 species
Solyc06g062610.2.1 Solyc06g062610 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc07g006990.3.1 Solyc07g006990 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Solyc09g010070.1.1 EMB2758, Solyc09g010070 Pentatricopeptide repeat-containing protein At4g33990... 0.02 OrthoFinder output from all 47 species
Tin_g04733 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30241 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005071_P002 OSB1, Zm00001e005071 ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 482 506
IPR002885 Pentatricopeptide_repeat 278 297
IPR002885 Pentatricopeptide_repeat 307 337
IPR002885 Pentatricopeptide_repeat 205 230
IPR002885 Pentatricopeptide_repeat 406 454
No external refs found!