Azfi_s0005.g008909 (ATRABA5C, ARA4,...)

Aliases : ATRABA5C, ARA4, ARA-4, RABA5C, ATRAB11F

Description : A-class RAB GTPase & original description: CDS=226-924

Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0005.g008909

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00020961.97	AtRABA1e, RABA1e	Vesicle trafficking.regulation of membrane tethering and...	0.02	OrthoFinder output from all 47 species
Cre03.g189250	ATRABA2A,...	Vesicle trafficking.regulation of membrane tethering and...	0.02	OrthoFinder output from all 47 species
Ehy_g00786	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.05	OrthoFinder output from all 47 species
LOC_Os05g20050.1	RAB-A2C,...	A-class RAB GTPase	0.02	OrthoFinder output from all 47 species
Lfl_g05986	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.05	OrthoFinder output from all 47 species
MA_113056g0010	AtRABA5a, RABA5a	A-class RAB GTPase	0.05	OrthoFinder output from all 47 species
Msp_g36456	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g39855	ARA-1, ATRABA5E,...	A-class RAB GTPase & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g08711	ATRABA5C, ARA4,...	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g14805	AtRABA5d, RABA5d	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g27440	ATRABA5C, ARA4,...	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e011737_P001	RABA2b,...	A-class RAB GTPase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	18	180

External Links

No external refs found!