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  5. Azfi_s0005.g009367

Azfi_s0005.g009367 (MSL6)


Aliases : MSL6

Description : mechanosensitive ion channel *(MSL) & original description: CDS=215-3106


Gene families : OG0000689 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000689_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0005.g009367

Target Alias Description ECC score Gene Family Method Actions
AT2G17000 No alias Mechanosensitive ion channel family protein 0.03 OrthoFinder output from all 47 species
AT3G14810 MSL5 mechanosensitive channel of small conductance-like 5 0.02 OrthoFinder output from all 47 species
Adi_g014541 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g01071 MSL4 mechanosensitive ion channel *(MSL) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene38455.t1 MSL5, Aspi01Gene38455 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G100600.1 MSL6, Ceric.02G100600 mechanosensitive ion channel *(MSL) & original... 0.05 OrthoFinder output from all 47 species
Ceric.22G069800.1 MSL5, Ceric.22G069800 mechanosensitive ion channel *(MSL) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g11186 MSL6 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01015113001 MSL10, ATMSL10 Solute transport.channels.MSL mechanosensitive ion channel 0.01 OrthoFinder output from all 47 species
Len_g00684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20097 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015319 MSL5 mechanosensitive ion channel *(MSL) & original... 0.03 OrthoFinder output from all 47 species
Sam_g09693 No alias mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g10758 MSL4 mechanosensitive ion channel *(MSL) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e036222_P001 MSL10, ATMSL10,... mechanosensitive ion channel (MSL) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
InterPro domains Description Start Stop
IPR006685 MscS_channel 736 937
No external refs found!