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  5. Azfi_s0006.g010527

Azfi_s0006.g010527


Description : not classified & original description: CDS=1-2745


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0006.g010527
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00129840 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g32430,... 0.05 OrthoFinder output from all 47 species
AT3G11460 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g022187 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g049577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18174 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18205 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g37861 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g33780 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35628 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36010 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g39533 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g04484 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06645 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g19540 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29942 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.28G027300.1 CRR22, Ceric.28G027300 not classified & original description: pacid=50569783... 0.09 OrthoFinder output from all 47 species
Ceric.34G056100.1 Ceric.34G056100 not classified & original description: pacid=50623335... 0.05 OrthoFinder output from all 47 species
Dcu_g05756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g13830.1 LOC_Os03g13830 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Len_g18962 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10138132g0010 No alias Pentatricopeptide repeat-containing protein At3g02330,... 0.05 OrthoFinder output from all 47 species
MA_121512g0010 No alias ssDNA-binding protein (OSB) 0.03 OrthoFinder output from all 47 species
MA_724726g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Nbi_g06769 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g24804 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g29103 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g32070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g40748 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g12341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29175 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02831 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63807 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g22129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06693 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53545 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g56263 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0079.g017838 No alias component *(CAL) of NADH dehydrogenase carbonic... 0.02 OrthoFinder output from all 47 species
Sam_g02656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25325 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27934 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g09530 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g53369 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g14871 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g17887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26884 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g35636 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e010182_P001 Zm00001e010182 Pentatricopeptide repeat-containing protein At2g36980,... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 750 770
IPR002885 Pentatricopeptide_repeat 272 304
IPR002885 Pentatricopeptide_repeat 347 370
IPR002885 Pentatricopeptide_repeat 549 573
IPR002885 Pentatricopeptide_repeat 67 96
IPR002885 Pentatricopeptide_repeat 244 264
IPR002885 Pentatricopeptide_repeat 140 161
IPR002885 Pentatricopeptide_repeat 165 213
IPR002885 Pentatricopeptide_repeat 577 622
IPR002885 Pentatricopeptide_repeat 372 420
IPR002885 Pentatricopeptide_repeat 473 520
IPR002885 Pentatricopeptide_repeat 675 722
No external refs found!