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  5. Azfi_s0007.g010669

Azfi_s0007.g010669


Description : not classified & original description: CDS=1-3072


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0007.g010669
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
Adi_g035612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07176 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene25448.t1 Aspi01Gene25448 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.13G001600.1 Ceric.13G001600 not classified & original description: pacid=50636694... 0.03 OrthoFinder output from all 47 species
Ceric.28G056200.1 Ceric.28G056200 not classified & original description: pacid=50570685... 0.03 OrthoFinder output from all 47 species
Dcu_g08840 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16812 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010869001 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
Len_g04787 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g19449 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008229 No alias not classified & original description: CDS=1-3597 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009200 OTP82 not classified & original description: CDS=343-1080 0.1 OrthoFinder output from all 47 species
Sam_g24755 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g051780.3.1 Solyc03g051780 Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
Solyc03g116840.3.1 Solyc03g116840 RNA editing factor (OTP81) 0.06 OrthoFinder output from all 47 species
Solyc07g005170.3.1 Solyc07g005170 Pentatricopeptide repeat-containing protein At1g09410,... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 345 370
IPR002885 Pentatricopeptide_repeat 957 979
IPR002885 Pentatricopeptide_repeat 447 469
IPR002885 Pentatricopeptide_repeat 855 880
IPR002885 Pentatricopeptide_repeat 141 164
IPR002885 Pentatricopeptide_repeat 166 213
IPR002885 Pentatricopeptide_repeat 573 620
IPR002885 Pentatricopeptide_repeat 676 722
IPR002885 Pentatricopeptide_repeat 881 927
IPR002885 Pentatricopeptide_repeat 473 518
IPR002885 Pentatricopeptide_repeat 371 417
IPR002885 Pentatricopeptide_repeat 269 315
IPR002885 Pentatricopeptide_repeat 779 825
No external refs found!