1. Home
  2. Species
  3. Equisetum hyemale
  4. Sequence
  5. Ehy_g02771

Ehy_g02771 (PUB13, ATPUB13)


Aliases : PUB13, ATPUB13

Description : E3 ubiquitin ligase & original description: none


Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g02771
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00072p00171260 PUB14, ATPUB14,... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00086p00031680 evm_27.TU.AmTr_v1... U-box domain-containing protein 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00153p00035720 ATPUB17, PUB17,... U-box domain-containing protein 1 OS=Medicago truncatula 0.02 OrthoFinder output from all 47 species
AT1G71020 No alias ARM repeat superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G21350 PUB8, B80 plant U-box 8 0.04 OrthoFinder output from all 47 species
Adi_g017517 ATPUB17, PUB17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g023452 ATPUB17, PUB17 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g057743 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057744 PUB14, ATPUB14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g03880 PUB12, AtPUB12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07222 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g20376 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g50065 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00484 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19192 ATPUB17, PUB17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0481.g073128 No alias not classified & original description: CDS=1-237 0.03 OrthoFinder output from all 47 species
Azfi_s2565.g112179 No alias not classified & original description: CDS=1-438 0.03 OrthoFinder output from all 47 species
Cba_g02580 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03737 PUB14, ATPUB14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G010300.1 ATPUB17, PUB17,... not classified & original description: pacid=50611933... 0.03 OrthoFinder output from all 47 species
Ceric.34G042900.1 PUB13, ATPUB13,... not classified & original description: pacid=50623547... 0.02 OrthoFinder output from all 47 species
Ceric.34G048100.1 Ceric.34G048100 E3 ubiquitin ligase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g08066 ATPUB17, PUB17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01430 PUB13, ATPUB13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04784 ATPUB17, PUB17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07191 PUB18, ATPUB18 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02285 ATPUB17, PUB17 E3 ubiquitin ligase *(PUB8) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g22153 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01020229001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Gb_29129 ATPUB17, PUB17 U-box domain-containing protein 1 OS=Medicago truncatula... 0.02 OrthoFinder output from all 47 species
LOC_Os06g01304.1 PUB14, ATPUB14,... E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
LOC_Os08g04470.1 PUB8, B80, LOC_Os08g04470 U-box domain-containing protein 8 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g20959 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
MA_84321g0010 PUB13, ATPUB13 E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species
Msp_g01498 PUB14, ATPUB14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g10832 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14639 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g16068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g24118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25238 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28901 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32554 PUB12, AtPUB12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33829 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g00381 ATPUB17, PUB17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09283 PUB14, ATPUB14 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g35847 PUB14, ATPUB14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30472 PUB13, ATPUB13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06266 PUB14, ATPUB14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013821 No alias not classified & original description: CDS=1-987 0.02 OrthoFinder output from all 47 species
Sam_g27911 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo231208 PUB13, ATPUB13 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Solyc03g114160.1.1 Solyc03g114160 E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
Solyc04g077850.3.1 Solyc04g077850 U-box domain-containing protein 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc05g008230.3.1 Solyc05g008230 E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species
Spa_g11287 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21993 PUB13, ATPUB13 E3 ubiquiTin ligase *(PUB15) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g30902 PUB13, ATPUB13 E3 ubiquiTin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g39824 ATPUB17, PUB17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e014566_P002 PUB9, ATPUB9,... E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
Zm00001e018578_P001 Zm00001e018578 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e028839_P001 Zm00001e028839 U-box domain-containing protein 16 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
InterPro domains Description Start Stop
IPR003613 Ubox_domain 377 447
IPR000225 Armadillo 592 627
IPR000225 Armadillo 671 705
IPR000225 Armadillo 506 545
No external refs found!