Aliases : REME1
Description : not classified & original description: CDS=1-1479
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Azfi_s0007.g010932 | |
| Cluster | HCCA: Cluster_46 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00103p00113040 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g65570... | 0.02 | OrthoFinder output from all 47 species | |
| AT3G20730 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G47840 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G25270 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G04780 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g003776 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g005491 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g005699 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g019854 | LPA66 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g023974 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g024582 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g034364 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g034668 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g035616 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g036547 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g060808 | EMB2261 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g067822 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g072273 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g076457 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g080167 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g082266 | OTP82 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g082454 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g087501 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g07273 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g40807 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g12351 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g17019 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g24411 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g26450 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g30893 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g30899 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05667 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g18255 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g18268 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g20391 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g63751 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aob_g27260 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g27303 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g04156 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene15587.t1 | DOT4, Aspi01Gene15587 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene29463.t1 | REME1, Aspi01Gene29463 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene35394.t1 | Aspi01Gene35394 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene66052.t1 | Aspi01Gene66052 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0029.g024142 | No alias | not classified & original description: CDS=203-3646 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0301.g063681 | REME1 | not classified & original description: CDS=1-1416 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g05269 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g06574 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g06947 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g07170 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07727 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g19309 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g20479 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g20779 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g34641 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.14G006100.1 | Ceric.14G006100 | not classified & original description: pacid=50634395... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z254100.1 | Ceric.1Z254100 | not classified & original description: pacid=50632850... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g39198 | OSB3 | ssDNA-binding protein *(OSB) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g21452 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g02806 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g03570 | EMB2758 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g15910 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g25598 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g26395 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g29998 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g07460 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g12413 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g17074 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g19509 | OTP82 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g24725 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01015461001 | ABCG40, PDR12,... | Solute transport.primary active transport.ABC... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g51790.1 | LOC_Os01g51790 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g02850.1 | OTP84, LOC_Os04g02850 | RNA editing factor (OTP84) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g08650.1 | LOC_Os06g08650 | Pentatricopeptide repeat-containing protein At2g03380,... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g39650.1 | LOC_Os06g39650 | Pentatricopeptide repeat-containing protein At1g31430... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g33724 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Len_g36740 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g55702 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g06708 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g11189 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g32919 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g03214 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g15612 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g17141 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g33650 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g44114 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g15698 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g24060 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g27639 | CRR22 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g41721 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ore_g12341 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g20095 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g20377 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g26958 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g27419 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g41304 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g43611 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g43675 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g02916 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g06978 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g14481 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g57720 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g57728 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g23581 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g30572 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06848 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g14437 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g53362 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g53946 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g57859 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g59297 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g61309 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0017.g007241 | No alias | protein S-acyltransferase *(PAT22) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16355 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g18488 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g37160 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo130453 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| Smo132819 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Smo80365 | CRR2 | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g064750.2.1 | Solyc04g064750 | RNA editing factor (MEF12). serine carboxypeptidase | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g06564 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g10323 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g12101 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g21942 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g04113 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g08462 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g23282 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g23468 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g26996 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e007462_P001 | Zm00001e007462 | Putative pentatricopeptide repeat-containing protein... | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003682 | chromatin binding | IEP | HCCA |
| MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
| MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | HCCA |
| MF | GO:0004427 | inorganic diphosphate phosphatase activity | IEP | HCCA |
| MF | GO:0004618 | phosphoglycerate kinase activity | IEP | HCCA |
| BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0006096 | glycolytic process | IEP | HCCA |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
| BP | GO:0006417 | regulation of translation | IEP | HCCA |
| BP | GO:0006448 | regulation of translational elongation | IEP | HCCA |
| BP | GO:0006449 | regulation of translational termination | IEP | HCCA |
| BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| MF | GO:0008942 | nitrite reductase [NAD(P)H] activity | IEP | HCCA |
| BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009719 | response to endogenous stimulus | IEP | HCCA |
| BP | GO:0009725 | response to hormone | IEP | HCCA |
| BP | GO:0009733 | response to auxin | IEP | HCCA |
| BP | GO:0009891 | positive regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0009893 | positive regulation of metabolic process | IEP | HCCA |
| BP | GO:0010033 | response to organic substance | IEP | HCCA |
| BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010608 | post-transcriptional regulation of gene expression | IEP | HCCA |
| BP | GO:0010628 | positive regulation of gene expression | IEP | HCCA |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016661 | oxidoreductase activity, acting on other nitrogenous compounds as donors | IEP | HCCA |
| MF | GO:0016774 | phosphotransferase activity, carboxyl group as acceptor | IEP | HCCA |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | HCCA |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
| BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0034248 | regulation of amide metabolic process | IEP | HCCA |
| BP | GO:0034250 | positive regulation of amide metabolic process | IEP | HCCA |
| MF | GO:0043021 | ribonucleoprotein complex binding | IEP | HCCA |
| MF | GO:0043022 | ribosome binding | IEP | HCCA |
| BP | GO:0043243 | positive regulation of protein-containing complex disassembly | IEP | HCCA |
| BP | GO:0043244 | regulation of protein-containing complex disassembly | IEP | HCCA |
| MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
| BP | GO:0045727 | positive regulation of translation | IEP | HCCA |
| BP | GO:0045901 | positive regulation of translational elongation | IEP | HCCA |
| BP | GO:0045905 | positive regulation of translational termination | IEP | HCCA |
| BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
| BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
| MF | GO:0046857 | oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor | IEP | HCCA |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
| BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
| BP | GO:0048522 | positive regulation of cellular process | IEP | HCCA |
| BP | GO:0051128 | regulation of cellular component organization | IEP | HCCA |
| BP | GO:0051130 | positive regulation of cellular component organization | IEP | HCCA |
| BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
| BP | GO:0051247 | positive regulation of protein metabolic process | IEP | HCCA |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
| MF | GO:0098809 | nitrite reductase activity | IEP | HCCA |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | HCCA |
| No external refs found! |
