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  5. Azfi_s0008.g011314

Azfi_s0008.g011314 (ATRGTA1, RGTA1)


Aliases : ATRGTA1, RGTA1

Description : EC_2.5 transferase transferring alkyl or aryl group, other than methyl group & original description: CDS=237-2333


Gene families : OG0004280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004280_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0008.g011314
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
LOC_Os06g46380.1 RGTA2, ATRGTA2,... subunit alpha of RAB-GTPase geranylgeranyltransferase... 0.04 OrthoFinder output from all 47 species
Tin_g11933 ATRGTA1, RGTA1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Zm00001e030328_P001 ATRGTA1, RGTA1,... subunit alpha of RAB-GTPase geranylgeranyltransferase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008318 protein prenyltransferase activity IEA Interproscan
BP GO:0018342 protein prenylation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP HCCA
MF GO:0004376 glycolipid mannosyltransferase activity IEP HCCA
MF GO:0005047 signal recognition particle binding IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
MF GO:0051751 alpha-1,4-mannosyltransferase activity IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002088 Prenyl_trans_a 42 70
IPR002088 Prenyl_trans_a 202 231
IPR002088 Prenyl_trans_a 157 184
IPR002088 Prenyl_trans_a 120 147
IPR002088 Prenyl_trans_a 85 114
No external refs found!