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  5. Azfi_s0008.g011391

Azfi_s0008.g011391


Description : heavy chain of Dynein microtubule-based motor protein complex & original description: CDS=1-6972


Gene families : OG0000220 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000220_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0008.g011391

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000076.78 RBP-DR1, AtRBP-DR1 Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000076.79 No alias Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00022075.30 No alias Cytoskeleton.microtubular network.Dynein... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00022075.31 No alias Cytoskeleton.microtubular network.Dynein... 0.01 OrthoFinder output from all 47 species
Cre03.g145127 No alias Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from all 47 species
Cre09.g392282 No alias Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from all 47 species
Cre09.g403800 No alias Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from all 47 species
Cre11.g476050 No alias Cytoskeleton.microtubular network.Dynein... 0.03 OrthoFinder output from all 47 species
Cre12.g484250 No alias Cytoskeleton.microtubular network.Dynein... 0.04 OrthoFinder output from all 47 species
Sam_g27883 No alias heavy chain of Dynein microtubule-based motor protein... 0.03 OrthoFinder output from all 47 species
Sam_g52674 No alias heavy chain of Dynein microtubule-based motor protein... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0007018 microtubule-based movement IEA Interproscan
MF GO:0008569 minus-end-directed microtubule motor activity IEA Interproscan
CC GO:0030286 dynein complex IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR041228 Dynein_C 2 280
IPR035706 AAA_9 1641 1862
IPR041466 Dynein_AAA5_ext 617 676
IPR041658 AAA_lid_11 2236 2320
IPR024317 Dynein_heavy_chain_D4_dom 1011 1253
IPR013602 Dynein_heavy_linker 2 239
IPR004273 Dynein_heavy_D6_P-loop 2091 2204
IPR035699 AAA_6 331 452
IPR041589 DNAH3_AAA_lid_1 873 955
IPR024743 Dynein_HC_stalk 1267 1610
No external refs found!