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  5. Azfi_s0008.g011495

Azfi_s0008.g011495 (CRR22)


Aliases : CRR22

Description : not classified & original description: CDS=1-2013


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0008.g011495
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
Adi_g003358 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g004061 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005693 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099295 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04184 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04254 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08251 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14336 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g20139 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g20440 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28235 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g29524 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g33115 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g37237 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07325 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.29G070800.1 Ceric.29G070800 not classified & original description: pacid=50625555... 0.05 OrthoFinder output from all 47 species
Dcu_g06366 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16644 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01018262001 No alias Pentatricopeptide repeat-containing protein At2g44880... 0.05 OrthoFinder output from all 47 species
LOC_Os01g72049.1 PTAC9, OSB2,... ssDNA-binding protein (OSB). TAC9 cofactor of... 0.05 OrthoFinder output from all 47 species
LOC_Os08g37520.1 LOC_Os08g37520 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Msp_g14157 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14968 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g23144 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g20232 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g60920 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0275.g027065 No alias not classified & original description: CDS=1-2244 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s3367.g028731 No alias not classified & original description: CDS=2473-3459 0.03 OrthoFinder output from all 47 species
Sam_g35189 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g114660.1.1 Solyc03g114660 Pentatricopeptide repeat-containing protein At1g18485... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
CC GO:0042579 microbody IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 69 92
IPR002885 Pentatricopeptide_repeat 377 400
IPR002885 Pentatricopeptide_repeat 508 538
IPR002885 Pentatricopeptide_repeat 480 502
IPR002885 Pentatricopeptide_repeat 547 570
IPR002885 Pentatricopeptide_repeat 274 294
IPR002885 Pentatricopeptide_repeat 172 194
IPR002885 Pentatricopeptide_repeat 94 142
IPR002885 Pentatricopeptide_repeat 402 450
IPR002885 Pentatricopeptide_repeat 300 347
IPR002885 Pentatricopeptide_repeat 198 244
No external refs found!