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  5. Azfi_s0008.g011642

Azfi_s0008.g011642 (ATGSR1, GLN1;1,...)


Aliases : ATGSR1, GLN1;1, ATGLN1;1, GSR 1

Description : EC_6.3 ligase forming carbon-nitrogen bond & original description: CDS=284-1321


Gene families : OG0000646 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000646_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0008.g011642
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00241880 ATGSR1, GLN1;1,... Nutrient uptake.nitrogen assimilation.ammonium... 0.03 OrthoFinder output from all 47 species
AMTR_s00025p00120730 GS2, ATGSL1,... Nutrient uptake.nitrogen assimilation.ammonium... 0.03 OrthoFinder output from all 47 species
AMTR_s00060p00116070 ATGSR1, GLN1;1,... Nutrient uptake.nitrogen assimilation.ammonium... 0.03 OrthoFinder output from all 47 species
AT5G35630 GS2, ATGSL1, GLN2 glutamine synthetase 2 0.03 OrthoFinder output from all 47 species
AT5G37600 ATGSR1, GLN1;1,... glutamine synthase clone R1 0.04 OrthoFinder output from all 47 species
Adi_g004718 ATGSR1, GLN1;1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32829 ATGSR1, GLN1;1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09560 GLN1;4 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene53323.t1 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021319.42 GLN1.3, ATGSKB6, GLN1;3 Nutrient uptake.nitrogen assimilation.ammonium... 0.01 OrthoFinder output from all 47 species
Gb_03066 GS2, ATGSL1, GLN2 cytosolic glutamine synthetase (GLN1). plastidial... 0.03 OrthoFinder output from all 47 species
Lfl_g11416 GLN1;4 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.01 OrthoFinder output from all 47 species
Msp_g09593 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.02 OrthoFinder output from all 47 species
Pir_g28181 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.02 OrthoFinder output from all 47 species
Solyc01g080280.3.1 GS2, ATGSL1,... plastidial glutamine synthetase (GLN2) 0.03 OrthoFinder output from all 47 species
Solyc04g014510.3.1 ATGSR1, GLN1;1,... cytosolic glutamine synthetase (GLN1) 0.03 OrthoFinder output from all 47 species
Zm00001e005453_P003 ATGSR1, GLN1;1,... cytosolic glutamine synthetase (GLN1) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEA Interproscan
BP GO:0006807 nitrogen compound metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR008146 Gln_synth_cat_dom 113 244
No external refs found!