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  5. Azfi_s0011.g012741

Azfi_s0011.g012741 (ATSS4, SS4, SSIV)


Aliases : ATSS4, SS4, SSIV

Description : starch synthase *(SS5) & original description: CDS=57-2150


Gene families : OG0000693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000693_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0011.g012741

Target Alias Description ECC score Gene Family Method Actions
Aev_g25563 ATSS4, SS4, SSIV not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g18951 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g33306 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g01991 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g11357 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14554 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04240 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05596 ATSS4, SS4, SSIV not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26184 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02313 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0224.g026292 ATSS4, SS4, SSIV not classified & original description: CDS=1-2052 0.03 OrthoFinder output from all 47 species
Sam_g12030 No alias starch synthase *(SS5) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004749 ribose phosphate diphosphokinase activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016778 diphosphotransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 229 440
No external refs found!