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  5. Azfi_s0013.g013183

Azfi_s0013.g013183


Description : not classified & original description: CDS=29-679


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0013.g013183

Target Alias Description ECC score Gene Family Method Actions
AT2G21090 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.06 OrthoFinder output from all 47 species
Aev_g26256 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37587 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02341.t1 Aspi01Gene02341 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61596.t1 CRR2, Aspi01Gene61596 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009069 CRR22 not classified & original description: CDS=1-1992 0.1 OrthoFinder output from all 47 species
Azfi_s1010.g095171 No alias not classified & original description: CDS=1-2025 0.08 OrthoFinder output from all 47 species
Ceric.10G079400.1 CRR22, Ceric.10G079400 not classified & original description: pacid=50612332... 0.06 OrthoFinder output from all 47 species
Len_g03710 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g18901 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g02080 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g13541 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001740 No alias not classified & original description: CDS=1-624 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006451 No alias not classified & original description: CDS=1-639 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016434 No alias not classified & original description: CDS=1-1746 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018953 No alias not classified & original description: CDS=533-943 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019335 No alias not classified & original description: CDS=1-1170 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0099.g019605 MEF19 not classified & original description: CDS=1-1827 0.05 OrthoFinder output from all 47 species
Sam_g26887 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g46045 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 139 185
No external refs found!