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  5. Azfi_s0013.g013277

Azfi_s0013.g013277 (ZFN1)


Aliases : ZFN1

Description : regulatory protein of RNA homeostasis & original description: CDS=215-1999


Gene families : OG0000297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0013.g013277
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00074p00109750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C3H zinc... 0.05 OrthoFinder output from all 47 species
AT3G48440 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.03 OrthoFinder output from all 47 species
Adi_g075180 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Adi_g077036 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Als_g57552 HUA1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Aop_g06598 ZFN1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene02854.t1 ZFN3, Aspi01Gene02854 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Dcu_g03925 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01017774001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.04 OrthoFinder output from all 47 species
LOC_Os01g15350.1 LOC_Os01g15350 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os12g21700.1 ZFN1, LOC_Os12g21700 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
MA_137427g0010 ZFN1 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Mp2g10620.1 No alias C3H zinc finger transcription factor 0.06 OrthoFinder output from all 47 species
Pnu_g22509 No alias regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Pnu_g30586 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ppi_g03060 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020073 ZFN1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Sam_g17138 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Sam_g48703 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Solyc06g054620.4.1 Solyc06g054620 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Spa_g37336 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0032954 regulation of cytokinetic process IEP HCCA
BP GO:0032955 regulation of division septum assembly IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1901891 regulation of cell septum assembly IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 241 266
IPR000571 Znf_CCCH 199 223
IPR000571 Znf_CCCH 464 485
IPR000571 Znf_CCCH 418 440
No external refs found!