Azfi_s0013.g013321


Description : not classified & original description: CDS=250-1647


Gene families : OG0004526 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004526_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0013.g013321
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00185p00043540 evm_27.TU.AmTr_v1... Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Aop_g01336 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.1Z205300.1 Ceric.1Z205300 not classified & original description: pacid=50613664... 0.08 OrthoFinder output from all 47 species
Cre17.g742200 No alias Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_16498 No alias Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_33541 No alias Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g56720.1 LOC_Os04g56720 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g20431 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10358489g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_20218g0010 No alias Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Sam_g06458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g081200.3.1 Solyc04g081200 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e041860_P003 Zm00001e041860 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 122 167
IPR000408 Reg_chr_condens 346 391
IPR000408 Reg_chr_condens 69 118
IPR000408 Reg_chr_condens 178 237
IPR000408 Reg_chr_condens 240 292
No external refs found!