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  5. Azfi_s0013.g013333

Azfi_s0013.g013333 (CCD4, NCED4)


Aliases : CCD4, NCED4

Description : not classified & original description: CDS=1-960


Gene families : OG0000239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000239_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0013.g013333

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene46265.t1 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Aspi01Gene56285.t1 NCED2, ATNCED2,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0143.g051511 ATNCED9, NCED9 EC_1.13 oxidoreductase acting on single donor with... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0030490 maturation of SSU-rRNA IEP HCCA
MF GO:0030515 snoRNA binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 21 257
No external refs found!